KEGG   Streptomyces griseochromogenes: AVL59_32175
Entry
AVL59_32175       CDS       T04729                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sgs  Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgs03400]
    AVL59_32175
Enzymes [BR:sgs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AVL59_32175
    5.6.2.6  RNA 3'-5' helicase
     AVL59_32175
DNA repair and recombination proteins [BR:sgs03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AVL59_32175
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ANP53583
UniProt: A0A1B1B442
LinkDB
Position
7477469..7481974
AA seq 1501 aa
MNQSTVGRKFANELLNELENLELPLLMWGMTEGALSEDDVLNCIEQFLDECDNPPALSAV
EILREMQGRALLFKVPWPSDGSIRYRTRFAEALRLTAGLRQLFRPRGDWADDTPNGWWRQ
GKRLVADYRLHVRYRRYPDRDIPGSQALKELRALPGWGDLQDRVAQDQLGGKNLARFQLE
ATQAVFSSLQGQNRSKGIIVSAGTGSGKTLSFYLPAFAAIAEHATNRVQNRIHTLALYPR
TELLRDQLRDAIVNARSVQSALVSQGKRPLRLGALYGGTPNHADDWRLQPGRGSGRWARV
GDGAVCPFLPCPSPECEDGELIWSDRDRAERVERLICRRCGDEIPHGQLALTRESLKKNP
PHLLFTTTEMLNNCSADGYLDSLLGWRGGSVPSLMLLDEVHTYSGVHGAQVAYLLRRWRD
AVGKPVTFVGLSATLRDANQFFAQLVGLRESDVDPIAPDDATMVREGREYALALRGDPVS
GASLLSTSIQTAMLWGRVLDNGDDAFLYGSTGFLFTDALDVTNRFYKYLRDAEGDQNHQG
RTNRRGDVLAGLRSRARPEPGPRYLEGQNWELVERIGHELDPDLRMHPLIIGRTSSQDAG
VNRNANLTIATASLEVGFNDPRVGLVLQHKAPRNAASFIQRRGRAGRERGTRPLTIVTLS
DYGRDRLAYQGYETLFAPEVAATTLPLKNRYVLKIQGAQALLDWAGRRMRAQVGRGDVRK
LLTTPDDPRILSEYENERLGLIKILHQLLTEERVQDEFARHLVKALKISVDDAQAVLWEQ
PRSLLMAVVPTALRRLRSRWEPLVNDPGMGKKAMLPEFITRTLFEPLNLPEVDLELPFDN
GDGSIEHMPIGKALTEAVPGRVSRRFGYLDDTHRTWLPIPDEDGHVLNLREIVTEGRLEG
TWQPHGHDGANFEVVRPLSLALSQPDPDIVDQSHGQPQWGTQIVVEDDAPLSEGIVPKPS
PWQRRIDTVSFATHAAGNPVQVRRMTFGAECNVRRERQNSQARTVRYELRGRPAALGFAL
GVDAIRFVLKPLNLDDPAVTEYLTTPQWRSLAFLHTVQDDPALSEISDSFQRERLAQIYL
TAFTLAGLDGSRTNAEVRALLKNGSWTHDLSKIFQVLYRDSDVTEQQVDGDRLVSELIKL
VANSTVITALDRAAELLVAEDISAETSPLARRTYRDTMAAAILAAAQRACPNAQDGDLIV
DTLPGEGEDSLTEVWLSETSVGGLGIVEQLVDFYSKDPRQFWGLVTSSLAPSEYEYVDAT
LTRFLRHVIDEPSGTAAQAMATLRAGSSAKEAEDALGVLREAWARLDGPPRHAAVAALST
RLLRPGSGPDTDVTALVLVDVWTELEQRLRVEVDARVIAYAVGSGKLQLEGARSLTADQV
FSLLWPRGHQARTQDLKHYQPYADDPVLERLLVQAAHDDRVPVIDVTKPTWDNAYRQQLT
ATSAVELVCPAGDAALLAQALKQVPVTPIDRDVLRVYGEICGVVRHQNEIRVRVELREAA
Q
NT seq 4506 nt   +upstreamnt  +downstreamnt
gtgaaccagagcacagtaggccgaaagttcgccaacgaactcctgaacgaacttgaaaac
cttgagttgcccctcctcatgtggggcatgacggaaggcgcgctctcagaggatgacgtc
ctcaactgcatcgagcagttcctcgacgaatgcgacaatccgccagcactatcagccgtc
gagatccttcgcgagatgcagggccgcgcgctgctcttcaaggtgccctggcctagcgac
ggatcaatccgctaccgcactcgttttgccgaagctctgcgcttgaccgccggactgcgc
caactcttccgccctcgcggagactgggcagacgacacccccaacggatggtggcggcaa
gggaagcgactcgttgctgactaccgcctccacgttcgctatcgccgttaccctgatcga
gatattccgggctcccaagcactcaaggaactgcgcgcccttcccggttggggcgatctc
caagaccgcgtcgcccaggaccaactgggcggcaagaacctcgcccgttttcagttggag
gcaacgcaagctgtcttctcctcactccagggccaaaaccgttccaagggcatcattgtc
agcgccggcaccggtagtggaaagacgttgtccttctacctgcccgccttcgcagccata
gcggagcacgcgaccaacagggtccagaacaggatccacactctggctctgtatccgcga
actgagttgctgcgggatcagttgcgcgatgcgatcgtcaatgctcgcagcgttcagagc
gcgctcgtcagccaggggaagaggcctctccgtctcggcgcactctacggaggcaccccg
aatcacgccgacgactggcgacttcagcccggacgaggttccggccgttgggcacgtgta
ggggacggcgccgtgtgtcccttccttccctgtcccagccctgagtgtgaagacggcgag
ttgatttggtccgacagggaccgcgctgaacgcgttgaacgcctcatatgccgacgctgc
ggggacgaaatcccgcacggccaactcgccctgactcgcgagtccctgaagaagaacccg
ccgcacctgttgttcaccactacggagatgctgaacaactgcagcgccgacggctacctc
gatagcctcctgggctggcgcgggggaagcgtgccgtccctgatgctcctcgatgaggtg
cacacctactcgggagtgcacggggcgcaggtcgcctacctcctacgcagatggagggac
gcagtaggtaaacccgtaactttcgtgggcctcagcgccacactgcgcgacgcgaaccag
ttcttcgcacagttggtcggcctgcgcgagagtgacgtggaccccatcgcacccgacgat
gccaccatggtgcgggaaggccgcgagtacgcgctcgcgctgcgaggcgacccagtctcg
ggagccagtctcctgtccacgtcgatccagactgcgatgctctggggccgcgtactcgac
aacggtgacgacgccttcctctacggctcgaccgggttcctattcacggatgccctggac
gtcaccaaccgcttctacaagtacctccgcgacgccgagggcgaccagaaccaccagggg
cgcacgaatcgccggggtgacgtgctggccgggttgcggtcacgtgcgcgccctgagccc
gggcctcgctacctcgagggacagaactgggaactcgtcgagcggatcggtcatgaactc
gaccccgatctccggatgcatcccttgatcatcgggcggacctcatcccaggacgcgggg
gtgaaccgcaatgcgaacctcaccatcgctacggcatcgttggaagtgggcttcaacgat
ccccgcgttggtctcgtccttcagcacaaggcaccgcggaatgctgcttcgttcatccag
cgccgcggccgcgctggccgagagcgcgggactcggccactgaccatcgtgaccttgtcg
gactacggccgcgatcgcctggcctaccagggctacgaaacgctctttgctccggaggtc
gctgccacgaccttgccgctcaagaaccggtacgtcctcaagatccagggagcccaggct
cttcttgactgggccgggcgcaggatgcgtgcccaggtcgggcggggcgacgtgcggaag
ctcctgacaacccctgatgacccgcggatcttgtccgagtacgagaacgagcgcctcgga
ctgatcaagatcttgcatcaactgctgaccgaggagcgtgtccaggacgagtttgcacga
cacctcgtcaaggcgttgaagatcagcgtcgacgacgcacaggccgtgttgtgggaacag
cctcgctccctcctcatggccgtcgtgcccacggctcttcgccggctccgctcccgttgg
gaacctcttgtaaacgaccccggcatgggcaagaaggccatgctgcccgagttcatcacc
cgcaccctgttcgagccgctgaaccttcctgaggtcgatctggagctccccttcgacaat
ggggatggatccatcgagcacatgcccatcggtaaggcgctgactgaagccgtgccggga
cgggtcagccgacgtttcgggtacctggacgacactcaccgcacgtggctccccatcccc
gacgaggacggccacgtgctcaacctgagggaaatcgtcaccgagggcaggctggaggga
acctggcagcctcatggacacgatggcgccaacttcgaagtcgtccgccccttgagtctc
gcgctttcccaacccgatcccgacatcgtggaccagtcccacggacagccgcagtggggc
acccagatcgtagtggaggacgacgcacccctcagtgaggggatcgtgccgaagccgtcc
ccctggcaacgtcgcattgacacggtcagctttgcgactcacgcggccggcaaccctgta
caagtgcgccgcatgacgttcggcgctgagtgcaacgtccgccgggaacgccagaacagc
caagcccgcactgttcggtacgaactccggggccgacctgccgctctcggattcgccttg
ggcgtcgatgctatccgcttcgtgctcaagccgctcaacctcgacgatccggctgtcacg
gagtacctcactacgcctcagtggcgctcgctggccttcttgcacacggttcaggacgat
ccggccttgtccgagatctccgacagcttccagcgggagcgcctggcccagatctatctg
accgcgttcactctggccggactcgacgggagccgcacgaacgctgaagtccgtgcgctg
ctgaagaacggttcctggactcacgatctctccaagatcttccaagtgctctaccgtgac
tccgacgtgacggagcagcaggtcgacggtgatcgactcgtgtcagagttgatcaagctc
gtcgccaacagcacggtcatcacagccctggacagggcagcagagctgctggtagcagag
gacatttcagccgagaccagcccgctcgcccggcgcacataccgcgacacgatggcggct
gcgattctcgctgctgctcaacgcgcgtgcccgaacgcacaggacggcgatctcatcgtt
gacacccttcccggggagggagaggactcgctcaccgaggtgtggctcagcgagacatcc
gtgggtgggttggggatcgtcgagcagttggtcgacttttactcgaaggatccccggcaa
ttctgggggcttgtgacgagtagcctcgcgccaagcgaatatgagtacgtcgacgccacg
ctgacccggttcctccggcacgtcatcgacgaacccagcggaacagctgcccaggcaatg
gcgacactccgggccggcagttccgccaaagaagccgaggacgctctgggcgtccttcgc
gaggcctgggcacggctcgacggcccgcctcggcatgcagccgttgctgccctgtccacg
cggcttctgcgcccggggtccgggcccgatactgacgtcaccgctctcgtccttgtcgac
gtatggacggagttggagcaacgtctccgggtcgaggtcgacgctcgcgtgatcgcatac
gcagtgggatccggcaagctccagttggaaggggcccggtccctgaccgcagaccaggtc
ttcagtcttctgtggcctcgtggccatcaggcccgcactcaagatttgaagcactaccag
ccatacgctgacgaccccgtcctcgagcgtctgctggtccaagcggcacacgatgaccgt
gtaccggtgatcgacgtgaccaagcccacctgggataacgcctaccggcagcaattgacc
gcaacctcggctgtcgagctggtctgtccagcgggagacgccgctctgctggcccaggcc
ttgaagcaggttccggtcacgcccatcgaccgggatgtgctgcgcgtctacggagaaatc
tgcggcgtggtccgccaccagaacgagattcgagtcagggtcgaattgagggaggcagcc
cagtga

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