Streptomyces griseochromogenes: AVL59_37320
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Entry
AVL59_37320 CDS
T04729
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03030
DNA replication
sgs03430
Mismatch repair
sgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL59_37320
03430 Mismatch repair
AVL59_37320
03440 Homologous recombination
AVL59_37320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_37320
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_37320
Enzymes [BR:
sgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL59_37320
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL59_37320
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL59_37320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANP54494
UniProt:
A0A1B1B6P2
LinkDB
All DBs
Position
complement(8600761..8604300)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GITPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWATNKTGLHNIFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGQFDEALKAAADYQD
IFGKDRYFMELMDHGIEIEHRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEMVDTSGMFEAKN
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPDDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDNVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKV
NKGVDIDLLGLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHKELEKPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARKNDYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAIYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVEAVACNKRTT
ESLIKAGAFDTLGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEESSEPGFGL
DVQFAEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGDSEVRI
RLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcctgcaatgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccattccgcgcagaaggcc
ggaatcaccccgatcatcgggatcgaggcgtatgtcgcaccggagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggttccggtggt
tacacccacaagacgatgtgggccaccaacaagacgggtctgcacaacatcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacg
atctcccagtggtccgaggggatcgtcgcctccaccggctgtccctccggagaggtccag
acgcggctgcgcctgggtcagttcgacgaggccctcaaggccgccgccgactaccaggac
atcttcggcaaggaccgctacttcatggagctgatggaccacgggatcgagatcgagcac
cgggtccgcgacggtctcctggagatcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacctacgcgcacgaggccggcgcccatgacgccctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggaggggtgc
gccaacacgctcctggtcgcggagatggtggacacctccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcatccccgacgaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcgcttcctgaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtcatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctatccgtacgccatgggcgaccggctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctgaacggcatcaccgacccctcgcacccgcgc
tacagcgaggcgggcgagatccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagaccatcaccgagcatgtcccggtctgggtgaggcacaccgac
aacgtcaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggtc
aacaagggggtcgacatcgacctcctgggcctcccgctcgacgacccgacgaccttcgaa
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggtggccccatgcgctcg
ctgctgcgcctgatgaagcccgacaacttcgaagacatctccgccgtgtcggcgctgtac
cgcccgggtcccatgggcatggactcgcacaccaactacgcgctgcgcaagaacaagctc
caggagatcaccccgatccacaaggagctggagaagcccctcgaagaggtcctggcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccgccgggtgatgggcaagaagaagcctgaggaa
ctggcgaagaacttcaccatcttccaggccggcgcccgcaagaacgactacagcgacgag
gcgatccaggccctgtgggacgtgctggtcccgttcgccggctacgccttcaacaaggcc
cactcggccgcgtacggcctggtgtcgtactggaccgcctatctgaaggcgaactacccc
gccgagtacatggccgcgctcctgacctccgtcaaggacgacaaggacaagtcggcgatc
tatctcaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcg
gtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctcgaagccgtgcgc
aacgtcggcaccaacgtggtggagtcgatcatcaagagccgcaaggcgaagggcaagtac
gcctccttccccgactacctcgacaaggtcgaggcggtcgcgtgcaacaagcgcaccacg
gagtcgctgatcaaggcgggagcgttcgacaccctcgggcacacccgcaaggggctgacg
gcccagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggtgaggaggagagcagcgagcccggcttcggactc
gacgtgcagttcgccgaggacgagtgggacaagacctacctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctggagcacgtcctgtccgac
aaggcggacgcgggcatcgcccagctcaccggcggcgagcacgccgacggcgcggtcgtc
accatcggcggcatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttcccggccacc
tatcagctggtgtccacgcagctggtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccgcggctcgtcgccatggagctgatggtcccggacctctcc
aacgcgggcaccaacgccccggtgatcctcaccatccccgccaccagggtcaccccgccc
atggtcagccgcctcggcgagatcctcagccatcacaagggcgacagcgaggtccggatc
aggctccagggcccgcgcaagaccaccgtgctgcgcctggaccggcaccgggtcaagccc
gacccggccctcttcggcgatctgaaggtgctgctcggcccctcctgcctggcgggctga
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integrated database retrieval system
