Streptomyces griseochromogenes: AVL59_41645
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Entry
AVL59_41645 CDS
T04729
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AVL59_41645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgs03019
]
AVL59_41645
03009 Ribosome biogenesis [BR:
sgs03009
]
AVL59_41645
Messenger RNA biogenesis [BR:
sgs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AVL59_41645
Ribosome biogenesis [BR:
sgs03009
]
Eukaryotic type
Pre-60S particles
RNases
AVL59_41645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANP55242
UniProt:
A0A1B1B932
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All DBs
Position
9579243..9579845
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDSALETMPEVVR
QMHTASGLLDELAGGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRGFLERDMGAL
ESYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTARAIAAKHVLPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gctctcatcgaggtggccgccctcgtcaccgattccgagctgaacgtactcggcgagggg
gtggacatcgtcatccgcccgccggactcggcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccgggctgctggacgagctggccggcggcaccacgctggccgac
gccgaggcgcaggtcctcgcctacgtccgcgagcacgtcaaggagcccggcaaggccccg
ctgtgcggcaactccgtcggcaccgaccgcggcttcctggagcgggacatgggggccctg
gagagctacctccactaccggatcgtggacgtctccagcatcaaggagctggcccggcgc
tggtacccgcgggcgtacttcaacagcccggagaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtcgatcgccgaactgaggtactaccgcgaggccatcttcgtcccgcag
cccggcccggactccgacaccgccagggcgatcgccgccaagcacgtcctgcctgctcag
tag
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