Streptomyces griseochromogenes: AVL59_46060
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Entry
AVL59_46060 CDS
T04729
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs00523
Polyketide sugar unit biosynthesis
sgs01100
Metabolic pathways
sgs01110
Biosynthesis of secondary metabolites
sgs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AVL59_46060
Enzymes [BR:
sgs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
AVL59_46060
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ANP56001
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Position
10518850..10520154
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AA seq
434 aa
AA seq
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MNEGKALLLKQVRQYHQDASPPTEFIPGVTPILPSGAVLDEEDRAALVGAALDMRIASGV
HSLKFERTFARTLGRRKAHLTNSGSSANLLALSALMAPELEDRRLVPGDEVITVAAGFPT
TVNPIIQNGLIPVFVDVELGTYNTTYERVEAAIGPRTRAIMIAHALGNPFPVAEIAQLAE
DRDLFLIEDNCDALGSLYQGRQTGTFGDFATLSFYPAHHITMGEGGCVLSDNLVLARVVE
SLRDWGRDCWCEPGENNKCRKRFEYQMGSLPYGYDHKYMFSHVGYNLKSTDLQAALGLTQ
LSKLSEFGVARRRNWLRLRDGLAGIPGLLLPEAAPDSDPSWFGFAITVLPEAPFGRRELI
DFLESRQIGTRLLFAGNLTRHPAYQDRKFRVVGDLGNSDIVTERTFWVGVYPGLTEEMID
YVVASIRQFTLSHR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagggaaaagcactgctgttgaagcaggttcgccaataccatcaggatgcctcg
cccccaacggagttcattccgggggtcacgcccattctgccgtccggtgccgtccttgac
gaggaggacagggcggcgctcgtcggggccgcactcgacatgcggatagcgtcgggggtc
cattccctgaagttcgagcggaccttcgccaggacactgggccgcaggaaggcacacctc
acgaactccgggtcctccgcgaatctgctcgccctgtcggctctgatggcacccgagctc
gaagaccgccggctcgtacccggtgatgaggtgatcaccgtcgcggcaggttttccgacc
acggtgaatcccatcattcagaacgggctgatacccgtcttcgtggacgtcgaactcggc
acttacaacacgacatacgagcgggtcgaggccgcgatcggtccccggacccgggccatc
atgatcgcgcacgcgctcggcaatccctttccggtggcggaaatcgcccagctcgccgag
gatcgcgacctgttcctcatcgaggacaactgcgacgccctgggatccctgtaccaggga
cgacagaccggcacgttcggcgatttcgccaccctcagtttctacccggcgcaccacatc
acgatgggtgagggcggctgtgtgctcagcgacaacctcgtgctggcgagggtcgtcgag
tcactgcgcgactgggggcgggactgctggtgcgagcccggcgagaacaacaagtgccgt
aagcgcttcgaataccagatggggtcgctgccctacggctacgaccacaagtacatgttc
tcgcacgtcggttacaacctgaagtcgaccgatctccaggccgcactcggactcacccag
ctgagcaagctctccgaattcggtgtcgcccggcggcgcaattggctccgactgcgcgac
gggctcgcggggatccccggacttctgctgcccgaggcggcccctgacagtgatccgtcc
tggttcggattcgcgatcaccgtgctgccggaagcgcccttcggccgtcgcgaactcatc
gacttccttgaatcacggcaaatcggcacgcgactgctcttcgccggcaacctcacccgg
cacccggcctatcaggaccggaagttccgggtcgtgggggacctcggcaacagcgacatc
gtcaccgagcggacgttctgggtcggagtctatccagggctgaccgaagagatgatcgac
tatgtggtcgcttccatccggcaattcaccctgagccaccgctga
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