Streptomyces griseochromogenes: AVL59_46385
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Entry
AVL59_46385 CDS
T04729
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03030
DNA replication
sgs03430
Mismatch repair
sgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL59_46385
03430 Mismatch repair
AVL59_46385
03440 Homologous recombination
AVL59_46385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_46385
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_46385
Enzymes [BR:
sgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL59_46385
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL59_46385
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL59_46385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
Rad17
AAA_22
AAA_30
AAA_14
AAA_5
zf-CXXC
AAA_16
AAA_18
nSTAND3
Mg_chelatase
AAA_19
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ANP56058
UniProt:
A0A1B1BB56
LinkDB
All DBs
Position
complement(10586344..10588638)
Genome browser
AA seq
764 aa
AA seq
DB search
MSSLALYRRYRPETFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPAGS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLAEVCGRENIPVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGAREEGVTYAMA
TSLLGYTDGSLLDSVVEAFATGDGAAAFEVVDRIIEGGNDPRRFVTDLLERLRDLVILAA
VPDAVEKGLIDAPADVLERMQAQAGTFGAAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAYGDERSVMARLDRLERGVGFAGGGSAPAMGYVPGPEAHAGMAQGGMAQGGAP
VPPGGGPAAARAAVRAGGGSGGQGAPAAAAPMTPAPAPAAPAPAAPAPTPAPAPAAPEPA
PQAPAPAPAPSATPAAPAPAAPAPAAPAPGAWPTAAPAGGGRRPGGWPTAAPAGAQQSPA
PAQPQRQAPAAPAAPSAPAPAAPAGGLDPRMLWPNILEAVKNRRRFTWILLSQNAQVAGF
DGTTLQLGFVNAGARDNFASSGSEDVLRQALSEQFNVQWKIEAVVDPSGGSVPPPSGGSP
GFGGGAGYGGTPAGGGYGAPAAPRPAASQPASPAPAAPQGGAQATPAPAGPAPRPAAAPE
PPPVAPEDDIPEDDDPDLDESALSGHDLIVRELGATVVEEFSNE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctgtaccgccgctatcgcccggagacctttgccgaggtcatcggg
caggagcatgtcaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcgggccgcgcgggtgcgggaagacgaccagcgcgcgcatcctggcgcgc
tgtctgaactgtgagcaaggtcccaccccgacgccctgcggggagtgccagtcctgccag
gacctggccaggaacggcccggggtccatcgacgtcatcgagatcgacgccgcctcccac
ggtggcgtggacgacgcccgtgagctgcgcgagaaggccttcttcggccctgccggcagc
aggtacaagatctacatcatcgacgaggcccacatggtcacgtcggccggcttcaacgct
ctgctgaaggtggtcgaggagcccccggagcatctcaagttcatcttcgccaccaccgag
cccgagaaggtcatcgggacgatccggtcgcggacccatcactatccgttccggctcgtg
ccgccggggacgctgcgggactacctggccgaggtgtgcggacgggagaacatccccgtc
gaggagggtgtgctcccgctcgtcgtgcgggccggcgccggttccgtgcgtgactccatg
tccgtcatggaccagctcctcgccggcgcgcgcgaggagggtgtgacctatgccatggcc
acctcgctgctcgggtacaccgacgggtccctgctcgactccgtcgtcgaggccttcgcc
accggtgacggggcggcggccttcgaggtcgtggaccggatcatcgagggcggcaacgat
ccgcggcgcttcgtcaccgacctgctggagcggctgcgggacctggtcatcctcgccgcc
gtgccggacgcggtggagaaggggctcatcgacgccccggccgacgtgctggagcgtatg
caggcccaggccgggacgttcggcgccgctgagctgagccgtgccgccgacctcgtcaac
gagggcctcaccgagatgcgcggagccacctcgccccgcctccagctcgaactcatctgc
gcacgcgtgctgctcccggccgcctacggggacgagcgttccgtgatggcccgcctcgac
cgcctcgagcgcggcgtcggcttcgctggcgggggcagtgcgcccgccatggggtacgtc
cccggacccgaggcccacgccggtatggcccaggggggcatggcccagggcggcgcgccg
gtgccgcccggtggtgggcccgccgccgcccgcgcggccgtacgggcggggggtggttcc
ggcggtcagggtgctccggccgccgcggcgcccatgactcccgcacccgcaccggcagct
cccgcaccggcagcccccgcacccacacccgcaccggctccggcggctcccgagcccgcg
ccccaggcgcccgctcccgctccggccccctcggccacccccgcggcacccgcccctgcg
gcacccgcccctgcggccccggccccgggtgcctggcccaccgccgcccccgccggcggc
ggccggcggcccggtggctggcccactgccgctccggccggagcccagcagagccccgct
ccggcacagccccagcgccaggcgcccgcggctccggccgctccctcggccccggctccg
gccgcccccgccggcggcctcgacccccgcatgctctggccgaacatcctggaggcggtg
aagaaccgccgccgcttcacctggatcctgctcagccagaacgcccaggtggccggcttc
gacggcaccaccctccagctcggcttcgtcaacgccggtgcccgtgacaacttcgcgagc
agcggcagcgaggacgtgctgcgccaggcgctgtccgagcagttcaacgtgcagtggaag
atcgaggcggtcgtcgacccctcgggcggctccgtgcccccgccgtccggcggctcaccg
ggcttcggcggaggcgcgggctacggcggcacgcccgccggcggtggctacggcgctccc
gcggcccctcgcccggcggcctcccagcccgcctcccccgcgcccgccgcacctcagggc
ggcgcccaggccaccccggcgccggccggccctgccccgcggcccgccgccgcgcccgag
ccgcccccggtcgccccggaggacgacatccccgaggacgacgaccccgacctcgacgag
tcggccctgtccgggcacgacctgatcgtccgggagctgggggcgacggtggtggaggag
ttctccaacgagtga
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