Streptomyces griseochromogenes: AVL59_46560
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Entry
AVL59_46560 CDS
T04729
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_46560
Transcription machinery [BR:
sgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AVL59_46560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_31
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ANP56080
UniProt:
A0A1B1BB90
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All DBs
Position
10616729..10617655
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AA seq
308 aa
AA seq
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MSAEQGSSKVLTPTSETAPKELDALDVLDDVTALEAVPTPAVEAAAPLPAPPAVADIDTR
TLSRSLFLRLAALDEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGL
IKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQ
KLDRSPTVTELATVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDS
ALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQ
LREGLISD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgcccacgagcgagacagcgcccaag
gagctcgacgctctcgacgtgctcgatgacgtcacggcgctcgaagccgtgccgaccccg
gccgtcgaggccgccgcccctctcccggcgccgccggccgtggcggacatcgacacccgc
accctgtcccgctccctgttcctgcggctcgccgcactcgacgaggacagccccgagcgc
gcctacgtccgggacaccctgatcgagctgaacctccccctcgtgcgctacgcggcagcc
cgcttccgctcgcgcaacgagccgatggaggacatcgtccaggtcggcacgatcggcctg
atcaaggcgatcgaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatg
ccgacggtcgtgggcgagatcaagcgcttcttccgcgacacctcgtggtcggtccgcgtc
ccgcgccggctccaggagctgcgcctggccctcaccaaggccagcgacgagctgtcccag
aagctggaccgctccccgacggtgacggagctggccacggtcctcggcgtctccgaggag
gacgtggtcgacggcctcgcggtcggcaacgcctacaccgcctcctccctcgactccccg
gcccccgaggacgacggcggcgagggctcgctcgccgaccgcctcggctacgaggacagc
gcgctggagggcgtggagtaccgcgagtccctcaagccgctgctggccaaactcccgccg
cgcgagcgccggatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggc
gaggaggtcggcatctcccagatgcatgtctcccggctgctgaccaggactctggcgcag
ctgcgcgaggggctcatctccgactga
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