KEGG   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_0085
Entry
SGGB_0085         CDS       T02018                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
sgt  Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Pathway
sgt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sgt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SGGB_0085 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgt03021]
    SGGB_0085 (rpoC)
   03400 DNA repair and recombination proteins [BR:sgt03400]
    SGGB_0085 (rpoC)
Enzymes [BR:sgt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SGGB_0085 (rpoC)
Transcription machinery [BR:sgt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SGGB_0085 (rpoC)
DNA repair and recombination proteins [BR:sgt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SGGB_0085 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23
Other DBs
NCBI-ProteinID: BAK26984
LinkDB
Position
94949..98587
AA seq 1212 aa
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGQGSFVAKMGAEAIQDLL
KRVDLKSEIAELKEELKTATGQKRIKAVRRLDVLDAFYKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEPGREGEGMIFKDRDEAVMAYRNGYVHLHTRVGI
AVDSMPNKPWTDEQKHKILVTTVGKILFNDIMPEDLPYLQEPNNANLTEKTPDKYFLAPG
QDIQSAIDSLEINVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKQEIIDAAHSKVEQINKAFRRGLMTDDDRYVAVTTTWREAKEELEQRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETL
EERLVGRYTKKSVKHPETGEVIVGPDVLITEDMAAEIVKAGVEEVTIRSVFTCNTRHGVC
RHCYGVNLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVVDIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVAVGDE
VHRGAPLTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRIMDPGDTELLPGTLMDIADFTDANKDVVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNELETSEEA
ETVEATVSTDAE
NT seq 3639 nt   +upstreamnt  +downstreamnt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaagtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactatcgtacgctcaaa
ccagaacgtgaaggtctttttgatgaagtaatctttggaccaacaaaagactgggaatgt
gcttgtggtaaatataaacgtattcgttataaaggaattgtttgtgaccgctgtggtgtt
gaagtaacacgtgctaaagttcgtcgtgaacgcatgggacacatcgaattgaaagctcca
gtatcacacatctggtacttcaaaggtattccatcacgcatgggacttactcttgacatg
agtccacgtgctcttgaagaagttatttacttcgctgcttacgtagttatcgatccaaaa
gatactccgcttgaaccaaaatcacttttgactgagcgtgaatatcgtgaaaaattacaa
gaatacggacaaggatcatttgttgcgaaaatgggtgctgaagctatccaagatcttctt
aaacgcgttgatttgaaatctgaaatcgctgaacttaaggaagaattgaaaacagcaaca
gggcaaaaacgtatcaaagctgtccgtcgtttggacgtgcttgatgccttctacaaatct
ggtaacaaaccagaatggatggtacttaacattttgccagttattccaccagatcttcgt
ccaatggttcaattggatggtggacgtttcgctgcatctgacttgaatgacctttaccgt
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgaattgaatgccccaggtatc
attgtgcaaaatgaaaaacgtatgttgcaagaagctgttgatgcccttatcgataacggt
cgtcgtggtcgtccaatcactggtcctggtagccgtcctcttaaatctttgagccacatg
cttaaaggtaaacaaggtcgtttccgtcaaaacttgcttggtaaacgtgttgacttctct
ggacgttcagttatcgccgtaggtccaacacttaaaatgtatcaatgtggtgtgccacgt
gaaatggctatcgaattgttcaaaccattcgtaatgcgtgaaatcgttgcgcgtgactat
gctggtaacgttaaagcagctaaacgtatggttgaacgtggtgatgaacgtatttgggat
attcttgaagaagttatcaaagaacacccagtgcttcttaaccgcgcaccgactcttcac
cgtttgggtatccaagccttcgaaccagtccttattgatggtaaagcacttcgtcttcac
ccacttgtttgtgaagcctacaatgccgacttcgatggtgaccaaatggccatccacgta
ccactttctgaagaagcacaagctgaagcacgtcttcttatgcttgccgcagaacacatc
cttaaccctaaagatggtaaaccagtcgtaacaccatctcaagatatggttcttggtaac
tactaccttactatggaagaaccaggtcgtgaaggtgaaggaatgatcttcaaggaccgt
gatgaagcagttatggcttaccgcaatggttatgttcacttgcatactcgtgtgggtatt
gccgttgatagcatgccaaataaaccatggactgacgaacagaaacataaaatcctggtt
acaactgtaggtaagattctcttcaacgatatcatgcctgaggatttaccttaccttcaa
gagccaaacaatgctaatctaacagaaaaaactccagataagtacttcttggcaccagga
caagatattcaatctgctattgacagcttggaaatcaatgtaccatttaagaagaaaaat
cttggaaatatcattgcggaaatctttaaacgtttccgtacaacagaaacatcagctttc
cttgaccgcttgaaagaccttggttactatcattcaactcttgctggtttgacagtgggt
atcgccgatatcccagttatcgataacaaacaagaaattatcgatgcagctcacagcaaa
gttgaacaaatcaacaaagccttccgtcgtggtttgatgactgatgatgaccgttatgtt
gctgttacaacaacatggcgtgaagctaaagaagaacttgaacaacgtctgattgaaaca
caagatcctaagaatcctatcgttatgatgatggactcaggagctcgtggtaacatttct
aacttctcacaacttgccggtatgcgtggtttgatggctgctccgaacggacgtatcatg
gaattgcctatcctatctaacttccgtgaaggtttgtctgtcttggaaatgttcttctct
actcacggtgctcgtaaaggtatgaccgatacagcccttaagactgccgactctggttac
cttactcgtcgtttggttgacgttgcccaagacgttatcattcgtgaagacgattgtgga
actgaccgtggtcttgttattcgtgctattactgatggtaaagaagtaacagaaactctt
gaagaacgtcttgttggtcgttacactaagaaatctgttaaacatcctgaaactggcgaa
gttatcgttggtccagatgtattgattactgaagatatggcagctgaaattgttaaagct
ggtgttgaagaagttacaatccgttcagtatttacatgtaacactcgtcatggtgtctgc
cgtcactgttatggtgtcaaccttgcaacaggtgatgcggttgaagttggtgaagcagtt
ggtacaattgccgctcaatctatcggtgaacctggtacacagcttacaatgcgtaccttc
cacacgggtggtgttgcgtcaaataccgatatcacacaaggtcttcctcgtatccaagaa
atctttgaagctcgtaatcctaaaggggaagccgttatcactgaagttaaaggtactgtt
gttgacatcgaagaagatgcttctacacgtactaagaaagtttacgttcaaggtaaaact
ggtatgggtgaatacgtggtaccattcactgcccgcatgaaagttgctgttggtgatgag
gtacaccgtggtgctccacttactgaaggttctatccaacctaaacgtctccttgaagtt
cgtgacacattatcagttgaaacttaccttcttgctgaagtacaaaaagtttaccgtagc
caaggggtagaaatcggtgataaacacgtcgaagtaatggttcgccaaatgcttcgcaaa
gttcgtatcatggatccaggtgatacagaacttctcccaggcacacttatggatattgca
gactttacggatgctaacaaagatgttgttatctctggtggtatccctgcaacatcacgt
ccagtgcttatggggattacaaaagcttcgcttgaaactaactcattcttgtcagccgca
tcattccaagaaacaactcgtgttcttacagatgctgctatccgtggtaagaaagatcat
cttcttggtcttaaagaaaatgttatcatcggtaaaatcattccagctggtacaggtatg
gctcgttaccgcaaccttgaaccacaagctgttaatgaacttgaaacaagtgaagaagca
gaaacagttgaagcaactgtttcaacagatgctgaataa

DBGET integrated database retrieval system