Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_0977
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Entry
SGGB_0977 CDS
T02018
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Pathway
sgt03030
DNA replication
sgt03430
Mismatch repair
sgt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGGB_0977 (dnaE)
03430 Mismatch repair
SGGB_0977 (dnaE)
03440 Homologous recombination
SGGB_0977 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgt03032
]
SGGB_0977 (dnaE)
03400 DNA repair and recombination proteins [BR:
sgt03400
]
SGGB_0977 (dnaE)
Enzymes [BR:
sgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGGB_0977 (dnaE)
DNA replication proteins [BR:
sgt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGGB_0977 (dnaE)
DNA repair and recombination proteins [BR:
sgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGGB_0977 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAK27848
LinkDB
All DBs
Position
1011490..1014597
Genome browser
AA seq
1035 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLEGYVKAAKSLGYQTIGIMDKDNLYAAFHFIEEAKKQSLQP
VVGLELSFAVEETLSLKLYLLAQDTTGYKNLMKISSKQMSSDIQLDELSDYLTGVAIVVP
YFEELETLSLPFDYYIGVDVNSPQKAYEKPIFPLYTVRYFETNEVETLHMLHAIRDNISL
KDAPPASQGQNLLACDILTQAFRETFPQALENQEKLISNIHYEFDTDLKLPRFNRQKPAQ
EELIERTEAGLRAKNLWLPAYQERLKKELSVIHKMGFDDYFLIVWDLLRFGRSRGYYMGM
GRGSAAGSLVSYALDITGIDPVKNNLLFERFLNEERYSMPDIDIDLPDVYRSEFLHYVRN
RYGSLHSAQIVTFSTFGAKQAIRDVFKRFGAPEHELTNITKKISFRDTLTSVYEKNLSFR
QIINSKIEYQKAFAIAKRIEGNPRQTSIHAAGVVMSDDNLTEHIPLKAGEDMMITQYDAQ
AVEANGLLKMDFLGLRNLTFVQRMQEKVAKDYGVTIDIKSIDLEDKKTLELFAAGKTKGI
FQFEQAGAINLLKRIQPRQFEDIVATTSLNRPGASDYTENFIKRRFGQEEVDLIDPLVAP
ILEPTYGIMLYQEQVMQIAQIYAGFTLGKADLLRRAMSKKKADDMQKMESDFLEGAQRLG
RPLETAKDLFSRMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDVMLNYSSADYI
TDALDSQFKVKKIDINTVPYSDKISDGQIYLGLKNLRGVPRDLCYWIIENRPFSSVEDFL
TRLPENYQKREMITPLVEVGAFDQFDKNRRKIIENLDPLFIFVNELGSLFADTSYSWIET
EDYSNAEKYRLEQSLLGVGISPHPLLEIARQSTKDFTALADLQENTEATILVELNQIRVI
RTKTKGEQMAFLSVTDTQKKFDVTLFPETFARFKDELQEGRFYYLTGKIQNRNNRLQMIL
NHIQEASSERLWLLLPNHLHDNEISEILSQYPGNIPVILHYQDSKQTLQSQRHLVQRTTE
LIEALSSYTLKTIYQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccagttagacacgaaaacggtctattcttttatggatagcttgattgactta
gaggggtatgttaaagcggctaaatctttaggctatcaaacaattggaattatggacaag
gataatctttacgcagcctttcattttattgaagaggctaaaaaacaatccttgcagcct
gttgttgggttagagttatcttttgccgttgaggagacactatcgttaaaactctaccta
cttgcgcaagatacaaccggttataaaaatttgatgaagatttcgagtaaacagatgtct
tcagacattcagctagacgaactctctgattatttgactggtgtagccatagtagtgcct
tatttcgaggaattagagacactgtcgcttccttttgattactacattggggttgatgtt
aattcgcctcaaaaagcatatgaaaagccgatttttccgctttatacggttcgttatttt
gaaacgaatgaggtggaaactcttcacatgctacacgctattcgtgataatattagctta
aaagatgctccgcctgcatctcaaggacaaaatctgttagcttgtgatattttgacacaa
gcgtttagagagacatttccgcaagcgttagaaaatcaggaaaagctcatatcaaacatt
cattatgagtttgacacagatttaaaattgccaagatttaatcgtcaaaagccagcacag
gaagaattgattgaacgaacagaagcgggattgcgagctaaaaatttgtggctgccagct
tatcaagagcgtttaaaaaaagaactatcagttatccataaaatgggctttgatgattat
ttcttaattgtctgggacttgttacgttttggtcgaagtcgtggttattatatgggaatg
ggacgtggttcagctgcgggaagcttggtttcttatgcccttgatattacaggaattgac
ccagtcaaaaataacctactttttgaacgtttcttgaatgaagaacgttacagcatgcca
gatattgatattgacctgccagatgtgtatcgtagcgagtttcttcattatgtgcgtaat
cgttacgggagtttgcattcagcgcagattgtgacgttttcaacctttggagcaaaacaa
gccattcgtgatgtttttaaacggtttggggctcctgagcatgaattgacaaatatcacg
aaaaaaatcagtttcagagatactttaacgtcggtttacgagaaaaatctttctttccgt
cagattattaattctaaaattgaatatcaaaaagcatttgcgattgcaaaacgtattgaa
ggcaatccacgtcagacctctatccacgcggcaggggttgttatgagcgatgataattta
acagaacatattccgttaaaagctggcgaagatatgatgattacgcagtatgatgctcaa
gcagttgaggcaaatggtcttttgaaaatggactttcttggcttacgtaatttgacattt
gtccaacgtatgcaagaaaaagttgctaaagattatggggtcactattgatattaaatca
atagatttagaggataaaaagactttagaattatttgcggctggcaagaccaagggaatc
ttccagtttgaacaagctggagcaattaatcttttgaaacgtattcaaccacgtcaattt
gaagatattgttgcaacgactagtttaaaccgaccaggtgctagtgattacactgaaaac
ttcatcaaacgtcgttttgggcaagaagaagtggatttgattgacccattggtagcaccg
attttagagccaacttatggcatcatgctttaccaagaacaggttatgcaaatcgctcaa
atttatgctggcttcactcttggaaaagcggatttgttacgtcgtgccatgtctaagaaa
aaggctgatgatatgcaaaaaatggaaagtgatttcttagaaggagcgcaacgattagga
cgtccacttgaaacggcaaaggatttatttagccgtatggcaaaatttgctggctatggt
tttaatagaagccacgcttttgcttattcagctttggctttccaactggcttattttaaa
gcgcattatcctgctgttttttacgacgttatgttgaattattctagcgctgactatatt
acagacgctctggattcacaatttaaagttaagaaaatcgatatcaataccgttccttac
agcgataaaatttcagatggacagatttaccttggcttaaaaaatctaagaggtgttcca
cgcgatttatgctactggattatcgaaaatcgtccatttagcagtgtcgaagatttctta
acacgattgccagagaattatcaaaagagagagatgattacacctcttgtagaagttggt
gcttttgaccaatttgataaaaatcgtcgaaaaatcattgaaaaccttgaccccctcttt
atctttgtcaatgagctcgggagtctatttgcggatacgtcttatagttggattgagaca
gaagattattcaaatgctgaaaaataccgcttagagcagagtttgttaggcgtaggaatt
agcccacatccgcttttagaaatcgcaaggcaatccacaaaagattttacagcgctagca
gatttgcaagaaaataccgaagcaactattttggtagaacttaatcagattcgtgtcatc
aggacaaaaacgaaaggtgagcaaatggcatttttgagtgttacagatactcagaaaaaa
ttcgatgttaccttgttcccagaaacctttgcgcgtttcaaagatgagcttcaagaagga
agattttattaccttactggaaaaattcagaatcgaaacaaccgcttgcagatgatttta
aatcatattcaagaagcaagtagtgaacgattatggctcttacttccaaatcatctccac
gataatgaaatctctgagatattatcacaatatccaggaaacattccagtgattttacac
tatcaagatagtaagcaaacattgcaaagtcaaagacatttggttcaaaggacaactgag
cttattgaagcgctatcaagttatactttgaaaacgatttatcaataa
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