Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_1084
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Entry
SGGB_1084 CDS
T02018
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgt03032
]
SGGB_1084 (topA)
03400 DNA repair and recombination proteins [BR:
sgt03400
]
SGGB_1084 (topA)
Enzymes [BR:
sgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SGGB_1084 (topA)
DNA replication proteins [BR:
sgt03032
]
Prokaryotic type
DNA Topoisomerases
SGGB_1084 (topA)
DNA repair and recombination proteins [BR:
sgt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SGGB_1084 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAK27952
LinkDB
All DBs
Position
complement(1131338..1133479)
Genome browser
AA seq
713 aa
AA seq
DB search
MATTTTTKAPTAVKKSSKKTTKKKTAAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHI
RDLKKSSMSIDFENNYEPQYINIRGKGPLINDLKKEAKKSKKVYLASDPDREGEAISWHL
AHILDLDENDKNRVVFNEITKDAVKNAFVEPRQIDMDLVDAQQARRVLDRIVGYSISPLL
WKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGFFKKGTKKFQASFYGIDGK
KLKLETNEDVQKVLALLTSDEFTVAKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKT
MMVAQQLYEGISLGKSGTQGLITYMRTDSTRISPIAQNDAANFITERFGEKYSKHGSRVK
NASGAQDAHEAIRPSNVNLTPESIAKHLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNL
EQNSVRFTANGSQVKFDGYLAVYNDSDKNKMLPDMVEGDIVKKVSTNPEQHFTQPPARYS
EATLIKTLEENGVGRPSTYAPTLDVIQRRYYVRLAAKRFEPTELGEIVNNLIVEFFPDIV
DVKFTADMEGKLDEVEEGKQQWQKVIDEFYKPFEKELAKAETEIEKIQIKDEPAGFDCDL
CGHPMVIKLGRYGKFYACSNFPECHNTKAITKEIGVTCPVCGKGQVIERKTKRNRIFYGC
DRYPECEFTSWDKPVGRSCPKSGDFLVEKKIRGGGKQVVCSNEECDYEEAKIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgactactacgaaagccccaacagctgttaaaaaatcaagcaaaaaaacg
acaaagaaaaaaacagctgccaagaaaaatttggttattgtggaatctccagctaaggca
aaaacaattgaaaaatatctcggacgtaattataaagttgtagcctcagtaggacatatc
cgcgatttgaaaaaatcaagcatgtctattgattttgaaaataattatgaaccacaatat
attaatattcgtggtaaaggtccattgattaacgaccttaaaaaagaagcgaaaaagtct
aaaaaagtttatctcgcaagtgacccggaccgtgaaggagaagcgatttcttggcactta
gctcatattttggaccttgatgaaaacgacaaaaaccgtgttgttttcaacgaaatcacc
aaagacgctgtcaaaaatgcctttgttgaaccacgccaaatcgatatggatttagtagat
gctcaacaagcgcgtcgtgttcttgaccgtatcgtgggatattctatctcaccattgctt
tggaaaaaagttaaaaaaggtctttcagcaggacgtgttcaatccgttgcattaaaacta
atcattgaccgtgaaaatgaaatcaaagcctttaaaccagaagaatactggacaattgac
ggtttctttaaaaaaggaacgaagaaattccaagcttcattttatggcattgatggtaaa
aaattaaaactcgaaacgaatgaagatgttcaaaaagttcttgctttattgactagtgac
gaatttaccgtagctaaggttgaaaagaaagaacgtcgtcgcaatgcaccacttccttat
acgacatcatctctccaacaagatgctgctaataaaatcaacttccgtacacgtaaaacc
atgatggttgcacagcaattgtacgaaggtatcagtcttggtaagagcggaacgcaaggt
ttgattacctatatgcgtactgactcaacacgtatcagtccaattgcgcaaaatgatgcc
gcaaactttatcacagaacgtttcggtgaaaaatactctaaacacggtagccgtgttaaa
aatgcttcaggagctcaagacgctcacgaagccattcgcccttcaaatgtcaatctaaca
ccagaatcaatcgctaagcacttagataaagaccaattaaaactttacacattgatttgg
aatcgttttgttgccagtcaaatgacagcagcagtctttgacacaatgaaagttaacttg
gagcaaaatagcgtacgctttactgccaatggtagtcaagtaaaatttgacggttattta
gccgtatataacgattctgacaagaataagatgttgcctgacatggttgaaggtgatatt
gttaagaaagtgtcaacaaatcctgaacaacactttacgcaaccaccagctcgttattct
gaagcaacacttattaaaacattggaagaaaatggcgttgggcgtccgtcgacttatgca
ccaacacttgacgttatccaaagacgttactatgttcgcttagctgcgaaacgttttgaa
cctacggaacttggtgaaatcgttaataatttgattgttgaattcttccctgatattgtt
gatgtcaaatttaccgctgatatggaaggtaaacttgatgaagtcgaagaaggcaaacag
caatggcaaaaagttatcgatgaattttacaaaccatttgaaaaagaacttgccaaagcc
gaaaccgaaatcgaaaaaattcaaatcaaagatgaaccagctggctttgattgtgatctt
tgtggacacccaatggttatcaagttaggtcgttatggtaaattctacgcttgtagcaat
ttcccagagtgtcacaatacaaaagcaatcactaaagaaatcggcgtgacttgtccagtc
tgtggcaaaggtcaagtaattgagcgtaaaaccaaacgtaatcgtattttctatggttgt
gaccgttatcctgaatgtgaatttacatcatgggataaacctgtcggacgttcttgtcca
aaatctggagacttcttggttgagaagaaaatccgcggtggtggtaaacaagtcgtctgc
agcaatgaagaatgcgactacgaggaagcaaaaattaaataa
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