Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_1153
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Entry
SGGB_1153 CDS
T02018
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgt03016
]
SGGB_1153 (truB)
Enzymes [BR:
sgt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SGGB_1153 (truB)
Transfer RNA biogenesis [BR:
sgt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SGGB_1153 (truB)
Prokaryotic type
SGGB_1153 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAK28019
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All DBs
Position
complement(1198290..1199168)
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AA seq
292 aa
AA seq
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MINGIINLRKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYM
TEAGKIYRGQICLGYSTTTEDASGERLETTPVSDVAVEEVDLALRSFIGEITQIPPMYSA
VKVNGKRLYEYARAGQTVERPERHVTIYDFKRTSPLEFKDDCCYFDFEVACSKGTYIRTL
SVDLGKKLGYASHMSYLEREASAGLRLENALTLAEIADKVALEDFSFLLPVEYGVMDLPR
VDLTEDQKIEISFGRKIALDRQDEQLAGFYEDKLVAILEPRDDLYKPHKVFI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggaattattaatttaagaaaagaagcaggaatgacgagtcacgacgcagtc
tttaagcttcgaaaaatattgcatgaaaagaaaattggtcacggaggaacgctagaccct
gacgttgtcggagttctgccgattgctgttggtaaagcaacacgtgtgattgaatacatg
acagaagctggcaagatttaccgtgggcagatttgtctagggtattcgacgacaacggaa
gatgctagcggtgaacgtcttgaaacaacgccagttagtgatgtagcagtagaagaagtt
gacttggctttgagaagttttatcggcgaaatcacacaaattcctcctatgtattcggca
gttaaagtcaatggcaaacgattatatgaatatgctcgcgctggtcaaacagttgagcga
cctgaacgccatgtgacaatctatgatttcaaacgcactagcccgttagaatttaaagat
gattgttgttattttgattttgaagtggcttgtagcaaaggaacatatattcgtacgttg
tcagttgatttaggaaaaaaacttggctacgctagtcatatgtcgtatttggaacgcgaa
gcttcagctggtttacgactagaaaatgccttaactttggcagaaatcgctgataaagta
gctttggaagatttttcatttcttcttcctgtcgaatacggcgttatggatttaccacgt
gttgatttgaccgaagaccaaaaaatagagatttcttttggacgaaaaattgctttggat
agacaagatgaacaacttgcgggattttatgaggataagttggtggcaattcttgagccg
cgagatgacctttacaaaccgcataaagtatttatctga
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