Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_1181
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Entry
SGGB_1181 CDS
T02018
Symbol
pcrA
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Pathway
sgt03420
Nucleotide excision repair
sgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SGGB_1181 (pcrA)
03430 Mismatch repair
SGGB_1181 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgt03400
]
SGGB_1181 (pcrA)
Enzymes [BR:
sgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGGB_1181 (pcrA)
DNA repair and recombination proteins [BR:
sgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGGB_1181 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SGGB_1181 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Pox_VLTF3
DSBA
Motif
Other DBs
NCBI-ProteinID:
BAK28043
LinkDB
All DBs
Position
complement(1225258..1227573)
Genome browser
AA seq
771 aa
AA seq
DB search
MNPLLNGMNDKQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF
TNKAAREMRERAMALNPATADTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWNERAILGTISNAKNDLLDEVAYENQAGDMYTQIVAKCYKAYQEELR
RSEAMDFDDLIMLTLRLFDQNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANAVINNNRN
RRPKKLWTQNADGEQIVYYRARDEREEAVFIASTIDNIVREEGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNVIANTADNISYERIVNEPKRGVGPG
TLEKIRDFANMQNMSLLDASANIMLSGVKGKAAQAVWDLANLLMKLRDDLDQMTVTELVE
AVLDKTGYLDALRVQNTLESQARIENIEEFLTVTKNFDDNQEDAPEDESGIDKLSRFLND
LALIADTDDGDAETAEVTLMTLHAAKGLEFPIVFLIGMEEGVFPLSRAAEDQDELEEERR
LAYVGITRAEQLLFVTNANTRTLFGKTSYNRPSRFIREIDDELLQYQGLARPANSSFGVR
YSNSSDEQLTFGQGMSLQQALQARKAKVQPTSSRGAQPFSKSGKAVPVGQSASASKEAVD
WQIGDIAHHKKWGDGTVLAVTGSGKTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggtatgaatgacaagcaggcagaggctgttaagacaacggaa
ggtccgcttttaatcatggcgggagctggttctggtaagacacgtgttttaacgcatcgt
attgcttacttaattgatgaaaaatttgtaaatccttggaatatccttgcgattaccttt
acgaataaagcggcgcgtgaaatgcgtgaacgtgctatggcattaaatcctgcgacggct
gatacgttgattgcaactttccatagcatgtgtgtgcgaattttgcgtcgtgatgctgac
cacattggctataatcgcaattttacgattgttgacccaggtgagcagcgcacgctcatg
aaacgtattttaaaaaatctgaatctcgaccctaagaaatggaatgaacgtgcgattctt
gggacaatttcaaatgccaaaaatgatttgcttgatgaggtagcttatgaaaatcaagca
ggtgacatgtacacgcaaattgttgccaaatgttataaggcttatcaagaagaattgcgc
cgcagcgaagcaatggattttgatgaccttatcatgttaacgcttcgtttgtttgaccaa
aatcctgatgttttggcttattaccaacaacgctaccaatacattcatgtagatgagtat
caagatactaaccatgcgcaatatcaattggtgaaacttttggcgtctcgttttaagaat
atctgtgttgttggtgatgctgaccaatccatttatggttggcgtggtgcagatatgcaa
aatatccttgattttgaaaaggattatccagaagcaaaagttgttctattggaagaaaat
tatcgttcaaccaagaaaatcttgcaagcagcaaacgcggtgattaataacaatcgcaat
cgtcgtccgaaaaaattgtggacgcaaaatgctgacggtgagcagattgtctattaccgt
gcgcgtgatgaacgtgaagaagcagtctttatcgcttctacgattgacaatattgtccgc
gaagaaggcaagaacttcaaagattttgcagttctataccgtaccaatgcgcaatcacgt
accattgaagaagctttgttaaaatcaaacattccttatacaatggttggtggaacaaaa
ttttacagccgtaaggaaattcgtgatgtgatttcatacctcaatgtgattgcaaatact
gcggataatatcagttatgaacgtatcgtcaacgaaccaaaacgtggcgttggtcctggt
acccttgaaaaaattcgtgattttgccaatatgcaaaacatgagtttgttagatgcgtct
gctaatatcatgctttctggcgtaaaaggaaaagcagcacaagcggtttgggatttggcg
aatctgctcatgaaacttcgtgatgacttagaccagatgactgttacagaattggtcgaa
gctgttcttgacaaaactggttaccttgatgcccttcgtgtgcaaaatacccttgaaagc
caagcgcgtattgaaaatatcgaagaattcttgactgtaactaagaattttgatgataat
caagaagatgccccagaagatgaatctggtattgacaaactaagtcgtttcttaaatgat
ttggctttgattgctgatactgatgacggtgatgcggaaactgcggaagtgaccttgatg
actttgcacgctgccaaggggttggaatttccaattgttttcttgattggtatggaagaa
ggcgtctttccactttctcgtgccgccgaggaccaagatgaattagaagaagaacgccgt
ttggcttacgttgggattacacgtgcagagcaattgctttttgtaaccaatgctaacaca
cgtactttgtttggtaagacaagctataaccgtccgtcacgttttattcgtgaaattgat
gacgaattattgcaataccaaggtttagcacgtccagctaattcatcatttggtgttcgt
tacagcaatagtagtgatgagcaattgactttcggacaaggcatgagcttacagcaagct
cttcaagcacgtaaagcaaaagttcaaccaacatcaagtcgtggagcgcagccattttca
aaatctggcaaagctgttccagttggtcaatcagctagcgcttcaaaagaagcggtcgat
tggcaaattggtgacattgctcaccataaaaaatggggtgacggtaccgttctagccgtt
acaggaagcggaaaaacacaagaacttaaaatcaatttcccagaagttggtcttaaaaaa
ctactagccagcgtcgcaccgattgagaagaaataa
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