Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_1740
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Entry
SGGB_1740 CDS
T02018
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Pathway
sgt03030
DNA replication
sgt03430
Mismatch repair
sgt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGGB_1740 (holB)
03430 Mismatch repair
SGGB_1740 (holB)
03440 Homologous recombination
SGGB_1740 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgt03032
]
SGGB_1740 (holB)
03400 DNA repair and recombination proteins [BR:
sgt03400
]
SGGB_1740 (holB)
Enzymes [BR:
sgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGGB_1740 (holB)
DNA replication proteins [BR:
sgt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGGB_1740 (holB)
DNA repair and recombination proteins [BR:
sgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGGB_1740 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
BAK28598
LinkDB
All DBs
Position
complement(1794784..1795659)
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AA seq
291 aa
AA seq
DB search
MELEHLQPQLSKEFNQILKSDRMNHAYLFSGDFASFDFALYLAKSRFCENLQDGLPCGKC
RECQLIAENEFSDVKIVKPSGQVIKTDTIRELMRDFSRSGFEGKSQVFIIQDCEKMHVNA
ANSLLKFIEEPQSSSYMILLTSDENKVLPTIKSRTQIFRFPKNKPLLIEQAEKAGVLKTQ
AEILAELAKTPKHLDELMQDKKILDVIQTCERFVTVLFKEKMLAYLETGHLVQVALEKSD
QELVFQLLPLFLAKQFNQKESLVYLEKSYKAQQMWKSNVSFQNALEYMVIS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaattagagcacttgcaaccccaactttctaaagagtttaatcaaattttgaaatca
gataggatgaaccacgcctatcttttttcaggggattttgcgagctttgattttgctctt
taccttgctaaaagtcgtttttgcgaaaatctccaagacggtttgccatgcgggaaatgc
cgtgagtgtcagttaattgctgaaaatgaattttcagatgttaagattgtcaaaccaagc
gggcaagttatcaaaactgatacgattcgtgaattgatgcgcgatttctcacgttcaggt
tttgaaggcaaatcacaagttttcatcattcaagattgtgaaaaaatgcatgttaatgcg
gcaaatagccttttgaaattcattgaagaaccgcaaagttcttcctacatgattttgttg
actagtgatgaaaataaggttttgccgacgattaaaagtcgaacacagattttccgtttt
ccgaaaaataagccgctgttgattgagcaagctgaaaaagctggagttttgaaaacacaa
gcagaaatattagcagaattggcaaaaacaccgaagcaccttgatgaattgatgcaagat
aaaaaaatattggatgtcattcaaacttgtgagcgttttgtcacggttctgtttaaggaa
aaaatgctagcttatttagaaacagggcatttggttcaagttgctttagaaaaatctgac
caagaacttgtttttcaactcttgccgctatttttagcaaagcaatttaatcaaaaagaa
agtttggtttatttagaaaaaagttataaagcgcaacaaatgtggaaaagtaatgtaagc
tttcaaaatgcgctagaatatatggtgatttcatga
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