Streptococcus gallolyticus subsp. gallolyticus ATCC 43143: SGGB_1888
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Entry
SGGB_1888 CDS
T02018
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sgt
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143
Pathway
sgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SGGB_1888 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgt03400
]
SGGB_1888 (uvrA)
DNA repair and recombination proteins [BR:
sgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGGB_1888 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SGGB_1888 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_22
AAA_33
nSTAND3
AAA_23
AAA_18
AAA_21
NACHT
AAA_14
Viral_helicase1
DnaJ_CXXCXGXG
NB-ARC
DUF87
AAA_15
cobW
MMR_HSR1
NTPase_1
Septin
PRK
DUF463
MeaB
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAK28744
LinkDB
All DBs
Position
complement(1939499..1942324)
Genome browser
AA seq
941 aa
AA seq
DB search
MQDKLIIRGARAHNLKNVNVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARMFLGNMEKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVDQVLELPERTRMQILAPVVRRKKGQHKTIFDRIQKDGYVRVRV
DGEIFDISEVPELSKSKMHNIEIVVDRLINKDGIRSRLFDSVEAALRLADGYVIIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGSKLEVDLDLVIPDRSKTL
REGALAPWNPISSNYYPAMLEQAMTSFGIDMDTPFENLTEEEQNLVLYGSGEREFHFHYI
NDFGGERNIDLPFEGVVNNIDRRYHETNSDFTRNVMRGYMNELPCATCHGYRLNNQALCV
RVGGENGLNIGQVSDLSVADHLELLTHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLG
NTLIVVEHDEDTMRQADWLIDVGPGAGDFGGQIVASGTPEDVAKNKKSITGQYLSGAKEI
PVPLERRKGNGRVLRVKGASENNLQNIDVTFPLGKFIAVTGVSGSGKSTLVNSILKKAVA
QKLNRNSAKPGKHKALEGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY
KDKNIAEILDMTVNDAVEFFAPIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGQIVATGTPEEVAKVKESFTGQYLKDKLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaattaattattcgtggggcacgtgcccacaatttaaagaatgtcaatgtt
gaaattccgcgggataagttggttgttgtgactggtttgtctggttcaggaaagtcaagt
ttggcatttgatacgatttacgcagaagggcaacgtcgttatgtagaaagtttgtcagct
tatgcgcgtatgtttcttggtaatatggaaaaaccagatgttgattcgattgagggtctc
agccctgctatttctattgaccaaaaaacaactagtaaaaatcctcgttctacggtaggg
acaacgacagaaatcaacgattatctgcgtcttttgtatgctcgcgtggggacaccgtat
tgtatcaatgggcatggtgccattacggcatcatctgttgagcaaattgttgaccaagtt
ttggaattgccagaacggacgcgaatgcagattttagcgccagttgtgcgtcgtaaaaag
ggacaacacaagacgatttttgaccgtattcaaaaagatggttatgtgcgtgtgcgcgtg
gatggcgagattttcgacatttcagaagttcctgagttatctaagagcaaaatgcacaat
atcgaaatcgttgttgaccgtttgattaataaagacggtatccgttcgcgcttgtttgat
tcggtggaagctgcgcttcgattggctgatggttatgtgattattgatactatggatggt
aatgaattgctcttttcagagcattattcatgtcctgtttgtggttttaccgttcccgaa
ttggaaccacgtcttttttcatttaacgcaccgtttggttcatgcccaacctgtgatggc
ttgggaagcaaattggaagtcgatttggatttggtgattcctgaccgtagtaaaacgctt
cgtgaaggggctttagcaccgtggaatccaatctcatctaactattacccagccatgcta
gaacaagccatgacttcttttggtattgatatggatacaccatttgaaaatttgacagaa
gaagaacaaaacttggtcttgtatggctcaggcgagcgtgaattccatttccactatatc
aatgactttggtggtgaacgtaatatcgaccttccgtttgagggagtcgtcaataatatt
gaccgtcgttatcatgaaacaaatagtgactttacacgtaatgttatgcgtggttacatg
aatgaattgccatgtgcaacttgtcatggttatcgtttaaataatcaagcactttgtgtt
cgtgttggtggcgaaaatggcttaaatattgggcaagtgtctgatttgtcagttgctgac
cacttggaacttttaactcacctcgaactctctgaaaatgaaaagacgattgcaacgccg
attgttaaggaaatcaaagaccgtctgaccttcttaaataatgttggcttgaattatttg
accttgtcgcgttctgcggggactttatctggtggtgaaagtcagcgtattcgcttggca
acgcaaattggttcaaacctatcaggtgtcctttatattttggatgaaccttcgattggg
cttcatcaacgtgacaatgaccgtttgatttccagcttgaaaaaaatgcgtgatttgggc
aacaccttgattgtcgttgaacacgatgaagataccatgcgccaagctgattggctcatt
gatgtcggaccaggtgcaggtgattttggtgggcaaattgttgcctctggaacgccagaa
gatgttgccaaaaataaaaaatcaattacagggcagtatttgtctggagcaaaagagatt
cctgtgccactagaacgtcgtaaaggaaatgggcgcgtgcttcgtgtcaaaggtgcttct
gaaaataacctgcaaaatattgatgtgactttcccacttggtaaattcattgcggtgaca
ggtgtttcgggttctggaaaatcaaccttggttaacagtattttgaagaaagctgttgct
caaaaattaaatcgcaattctgccaaacctggtaaacacaaggcacttgaaggtattgag
aacattgaacgcttgattgacattgaccaaagcccaatcggccgtactccgcgttcaaat
cctgcaacttacacaggtgtttttgatgatattcgtgacctttttgctaagaccaatgaa
gctaagattcgtggttacaaaaaaggacgtttctcatttaacgtcaaaggtggacgttgc
gaggcttgctctggtgacggaattatcaagattgaaatgcacttcttgccagatgtttac
gtaccttgcgaggtttgtcatggtacacgttataacagtgaaacgcttgaagttcattac
aaagacaaaaatatcgctgaaattcttgatatgacagtcaatgatgcggttgaattcttt
gcaccaatccctaaaatcgcacgcaaattgcaaactatcaaagacgttggacttggttat
gttactcttggacaaccagccacaacgctgtctggtggtgaagcacagcgtatgaaattg
gcgagtgaacttcacaaacgctcaactggtaagagcctttatatccttgatgaaccaacg
acaggacttcacacagatgacattgctcgtctgcttaaagtccttcaacgcttcgtggat
gatggaaacaccgtgcttgtcattgaacacaatcttgatgtaattaagacagctgaccac
attatcgaccttggaccagaaggcggtgtcggtggcggacaaatcgttgccacaggcaca
ccagaagaggtcgccaaagtcaaagaatccttcacaggacaatatttaaaagacaaattg
aaataa
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