KEGG   Streptomyces glaucescens: SGLAU_02470
Entry
SGLAU_02470       CDS       T03327                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sgu  Streptomyces glaucescens
Pathway
sgu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SGLAU_02470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgu03400]
    SGLAU_02470
Enzymes [BR:sgu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SGLAU_02470
DNA repair and recombination proteins [BR:sgu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SGLAU_02470
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AIR96522
UniProt: A0A089WYK1
LinkDB
Position
576444..577424
AA seq 326 aa
MTLPLIAPMLATPGTLPPAAQDARWAYETKQDGQRAVVYLAGDGGVVLRARSGEEITGAY
PELRPLGAALGGTPAILDGEVLALDERGRADFQLLQSRMGLAHAPARAARRAARVPVHLV
LFDVLHLAGASLLRRPYTERRARLLELGLEGPFWSTPGALVGHGEEALRATREHGLEGLV
CKRLDSVYEPGVRSRAWIKIRNMRGEDVVVGGWLPGKGRLTGLPGAVLVGQRAGDTLRYV
GSVGTGWSEAERTELAALLGELATDVCPFRPAPAAPGAHWVLPRLVGEVRYSTRTRAGLL
RQPSWLRLRPDLTPEESSADLPDDMV
NT seq 981 nt   +upstreamnt  +downstreamnt
gtgaccctgccgctgatcgcccccatgctcgccacccccggcaccctgccgcccgccgcc
caggacgcgcgctgggcgtacgagaccaagcaggacggccagcgggcggtggtgtacctc
gccggggacggcggcgtggtgctgcgggcccggtccggggaggagatcaccggcgcctac
cccgagctgcggcccctcggcgccgccctcggcggcacgcccgcgatcctcgacggcgag
gtgctggcgctggacgaacggggccgtgccgacttccagctcctccagtcccggatgggc
ctcgcccacgcccccgccagggcggcccgccgggcggcccgggtcccggtccacctcgtg
ctgttcgacgtgctgcacctcgcgggcgcctccctgctccgccggccctacaccgagcgg
cgcgcgcgcctgctggagctgggcctggagggacccttctggtcgacgccgggagcgctg
gtggggcacggcgaggaggcgctgcgggcgacccgtgagcacggtctcgaaggactggtc
tgcaagcggctggactcggtgtacgagccgggggtgcggtcccgcgcctggatcaagatc
cgcaacatgcgcggggaggacgtcgtcgtgggcggctggctgcccggcaagggccggctg
accgggctgccgggcgccgtactggtgggccagcgggccggggacacgctgcgctacgtc
ggcagcgtgggcaccggctggagcgaggccgagcgcaccgagctggccgcgctgctcggc
gaactggcgaccgatgtctgcccgttccgcccggcgccggcggcaccgggcgcgcactgg
gtgctgccccggctggtgggcgaggtgcggtacagcacccgcacccgggccggactgctc
cgccagccgtcgtggctgcggctgcggccggacctcacgcccgaggagtcgtcggccgac
ctgccggacgacatggtctga

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