Streptomyces glaucescens: SGLAU_02850
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Entry
SGLAU_02850 CDS
T03327
Symbol
rtcB1
Name
(GenBank) RNA-splicing ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sgu
Streptomyces glaucescens
Brite
KEGG Orthology (KO) [BR:
sgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgu03016
]
SGLAU_02850 (rtcB1)
Enzymes [BR:
sgu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SGLAU_02850 (rtcB1)
Transfer RNA biogenesis [BR:
sgu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SGLAU_02850 (rtcB1)
Prokaryotic type
tRNA splicing ligases
SGLAU_02850 (rtcB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIR96598
UniProt:
A0A089X0P5
LinkDB
All DBs
Position
complement(650873..652282)
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AA seq
469 aa
AA seq
DB search
MPLVEETPYRFRLDPHGAMRVPGVVFASRDLLADAEQSLGQVANVATLPGIVGASYAMPD
IHWGYGFPIGGVAATTVDQGGVISPGGVGFDISCGVRLLAADCDRARLAPAFDAVMAGLD
RAIPRGAGPGGVWRPGPGELDRILEGGARYAVARGYGEERDLVRCEDGGAVGDAVLREVG
ERARERGLGQVGSLGSANHFLEVQQVCDVYDERAAEAFGIAAGQVCVMIHCGSRGLGHQI
CTDHVRAMDRAMARYRISVPDRQLACTPVDSPEGRAYLGAMAAAANYGRANRQLLAHAAR
QVFRRAAGVHLSLVYDVSHNLAKLETHQVDGRPRRLCVHRKGATRAFPPGHPDLPADLRD
TGQPVLIPGTMGTASYVLAGVTGGDAFASTCHGAGRRMSRHQAARTVTGRELRARLERAG
IAVRPRSWRGLSEETPEAYKDVGAVVAASEGAGLCRTVARLVPLGVVKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccactcgtcgaggagaccccgtaccgcttccgcctcgacccgcacggcgccatgcgg
gtgcccggcgtggtcttcgcctcccgcgacctgctcgccgacgccgagcagtccctcggg
caggtcgccaacgtcgccaccctgcccggcatcgtcggcgcctcgtacgccatgcccgac
atccactgggggtacggcttccccatcggcggggtcgccgcgaccaccgtcgaccagggc
ggggtgatctccccgggcggggtcggcttcgacatctcctgcggggtgcggctgctggcc
gccgactgcgaccgagcccggctggcccccgcgttcgacgccgtgatggccggcctggac
cgggcgatcccgcgcggcgccggacccggcggggtgtggcggcccggccccggcgaactg
gaccgcatcctcgaaggcggcgcccgctacgccgtcgcgcgggggtacggcgaggagcgc
gacctggtccgctgcgaggacggcggcgcggtcggcgacgccgtgctgcgcgaggtcggc
gagcgggcccgcgaacgcggcctcggccaggtcggcagcctgggctccgccaaccacttc
ctggaggtccagcaggtctgcgacgtctacgacgagcgggccgccgaggccttcggcatc
gccgccggacaggtctgcgtcatgatccactgcggttcgcgggggctcgggcaccagatc
tgcaccgaccacgtccgggcgatggaccgggccatggcccgctaccgcatctcggtgccg
gaccggcagctcgcctgcaccccggtggactccccggagggccgggcctacctcggcgcg
atggccgcggcggccaactacggccgcgccaaccgccagttgctggcccacgcggcccgc
caggtgttccgccgcgccgccggcgtccacctctccctggtgtacgacgtctcccacaac
ctggccaagctggagacccaccaggtcgacgggcggccccgccggctgtgcgtgcaccgc
aagggcgccacccgcgccttcccgcccggccaccccgacctgcccgccgacctgcgcgac
accgggcagccggtgctgatccccggcaccatgggcaccgcctcctacgtgctggccggg
gtgaccggcggcgacgccttcgcctcgacctgccacggcgcaggccgcaggatgagccgt
caccaggccgcccgcacggtcaccggccgggagctgcgggcccgcctggaacgcgcgggc
atcgccgtgcgcccccgctcctggcgcggcctgtccgaggagacgccggaggcgtacaag
gacgtcggcgcggtggtcgccgcgagcgagggcgcggggctgtgccggaccgtggcccgg
ctggtgccgctgggcgtggtgaagggctga
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