Streptomyces glaucescens: SGLAU_11290
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Entry
SGLAU_11290 CDS
T03327
Symbol
hrdA
Name
(GenBank) RNA polymerase principal sigma factor HrdA
KO
K03086
RNA polymerase primary sigma factor
Organism
sgu
Streptomyces glaucescens
Pathway
sgu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SGLAU_11290 (hrdA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgu03021
]
SGLAU_11290 (hrdA)
Transcription machinery [BR:
sgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGLAU_11290 (hrdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
AIR98259
UniProt:
A0A089XAT1
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Position
complement(2587732..2588886)
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AA seq
384 aa
AA seq
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MQTQTLVPTDSRTPAEPDAAPDVLAALPPQSRAAHHPETRTETQTETEPESEPPDAGAGT
EPEFVEPGPVEPPPGRAVDTSGPSSDLFRQYLREIGRVPLLTAAEEVELARRVEAGLFAE
EKLLNTPDLDSQLALDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEG
NLGLIRAVEKFDYARGFKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQR
RMLQERGHEPTPEEVAAHLDLPPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDA
ASPVESAAFLLLKEHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIR
QIESKTLNKLRDHAFAEQLRGYLD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcgtccctaccgacagccgcaccccggcggagccggacgcggca
ccggacgtgctggcggccctgccgccgcagagccgtgcggcgcaccacccggagacacgg
acggagacgcagacggagaccgaaccggaatccgagccgcccgacgccggggccggcacc
gaaccggagttcgtcgagcccgggcccgtcgagccgccgcccggccgggccgtcgacacc
agcggtccctcctccgacctgttccggcagtacctgcgcgagatcggccgggtgccgctg
ctcaccgccgccgaggaggtggaactcgcccgccgggtcgaggccggcctgttcgccgag
gagaagctgctcaacacccccgacctggacagccagttggcgctcgacctggaccggctc
gtggtcatgggccggatggccaagcgccggctgatcgaggcgaacctgcggctggtggtg
tcggtcgccaagcggtacgtcggccgcggactgaccatgctcgacctcgtgcaggagggc
aacctgggcctcatccgggccgtcgagaagttcgactacgcccgcggcttcaagttctcc
acctacgccacctggtggatccgccaggccatgtcccgcgccctcgccgaccaggcccgc
accatccgggtcccggtgcacgtcgtcgagctgatcaaccgggtggtgcgggtgcagcgc
cggatgctccaggagcgcggccacgaacccacccccgaagaggtcgccgcccatctcgac
ctgccgcccgagcgggtgagcgaggtgctgcggctcgcccaggagcccgtctccctgcac
gcccccgtcggtgaggaggacgatgtcgcgctgggcgacctgatagaggacggcgacgcc
gcctcgcccgtggagtccgccgcgttcctgctgctcaaggagcacctggaggcggtcctg
tccactctcggcgagcgcgagcgcaaggtggtccagctccgctacgggctggccgacggc
cgcccccgcaccctggaggagatcgggcgcatcttcggcgtgacccgcgagcggatccgc
cagatcgagtccaagaccctcaacaaactccgcgaccacgccttcgccgagcagctgcgg
ggctacctggactga
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