Streptomyces glaucescens: SGLAU_25075
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Entry
SGLAU_25075 CDS
T03327
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgu
Streptomyces glaucescens
Pathway
sgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGLAU_25075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgu03019
]
SGLAU_25075
03400 DNA repair and recombination proteins [BR:
sgu03400
]
SGLAU_25075
Enzymes [BR:
sgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGLAU_25075
Messenger RNA biogenesis [BR:
sgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SGLAU_25075
DNA repair and recombination proteins [BR:
sgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SGLAU_25075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
DUF8096
Motif
Other DBs
NCBI-ProteinID:
AIS00953
UniProt:
A0A089XAI2
LinkDB
All DBs
Position
complement(5707522..5709696)
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AA seq
724 aa
AA seq
DB search
MGRMEHTSNADLRAEADAVLARLVGDATGAARLREDQWRAIEALVAERRRALVVQRTGWG
KSAVYFVATALLRARGSGPTVIVSPLLALMRNQVDSAARAGIHARTINSSNTEEWDAVQA
EIAAGAVDVLLVSPERLNNPDFRDQVLPALAAATGLLVVDEAHCISDWGHDFRPDYRRLR
TMLADLPAGVPVLATTATANARVTADVADQLGTGGSTDALVLRGPLDRESLSLGVLRLPD
AAHRMAWLADHLDDLPGSGIIYTLTVAAAEEVTAFLRHRGHTVASYTGKTENAERQQAEE
DLLGNKVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLP
GREDEAIWEYFASLAFPPEDLVRRTLDVLARADRPLSLPALEPLVELRRSRLETMLKVLD
VDGAVRRVKGGWIATGQPWTYDTERYDWVARQRRAEQQAMREYASTSGCRMEFLQRQLDD
EGAKPCGRCDNCAGPRFTADTSTTAVEAARTDLGRAGVAVEPRRMWPTGLPAIGVDLKGR
IPAGEQAATGRALGRLSDIGWGNRLRPMFAPQAPDGPVPDDVAKAVVGVLADWARGPGGW
APGAPEAQPRPVGVVTIASRSRPRLVGSLGEHIARVGRLPLLGTVEYTAGSGPVPRSNSA
QRLKVLDGALTVPPALAATLADVHGPVLLVDDFTETGWTLAVVARMLRRAGAEGVLPLVL
AVQG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcatggagcacacgagcaacgcggatctccgggcggaggccgacgcggtcctc
gcccgcctcgtcggtgacgccacgggcgcggcacggctgcgcgaggaccagtggcgggcc
atcgaggcgctggtcgccgagcggcgccgggccctggtcgtccagcgcacgggctggggc
aagtccgcggtgtacttcgtggcgacggcgctgctgcgtgcccggggcagtggccccacc
gtgatcgtctccccgctgctcgcgctcatgcgcaaccaggtcgactccgcggcgcgggcc
ggcatccacgcccggacgatcaactcctcgaacaccgaggagtgggacgccgtccaggcg
gagatcgccgccggtgcggtggacgtcctgctggtcagtccggagcggctcaacaatccc
gacttccgcgaccaggtgctgcccgcgctcgccgcggcgacgggcctcctcgtcgtggac
gaggcgcactgcatctcggactggggtcatgacttccgccccgactaccggcgcctgcgg
accatgctggccgacctcccggcgggcgtccccgtgctcgcgacgaccgccaccgccaac
gcccgcgtgaccgctgacgtcgcggaccagctcggcaccgggggctccacggacgccctg
gtgctgcggggcccgctggaccgcgagagcctgagcctgggtgtgctgcggctgccggac
gccgcgcaccggatggcgtggctcgccgaccacctcgacgacctgccgggctcgggaatc
atctacacgctcaccgtggcggccgccgaggaggtcaccgccttcctgcggcaccgcggg
cacacggtcgcgtcgtacacgggcaagacggagaacgccgagcggcagcaggcggaggag
gatctgctcggcaacaaggtgaaggcgctggtggccacgtccgccctcggcatggggttc
gacaagcccgacctgggattcgtggtccacctcggctcgccctcctcccccatcgcctac
taccagcaggtcggccgcgccggacgtggtgtggagcatgccgaggtgctgctcctgccg
gggcgggaggacgaggcgatctgggagtacttcgcctccctggccttcccgccggaggac
ctggtccgccgcaccctcgacgtcctggcccgcgcggaccgtcccctgtccctgcccgcc
ctggagccgctggtggagctgcgccgctcccgcctggagacgatgctcaaggtcctggac
gtcgacggggcggtccggcgggtcaagggcggctggatcgcgacggggcagccgtggacg
tacgacaccgagcgctacgactgggtggcccggcagcggagggccgaacagcaggcgatg
cgcgagtacgcctcgacgagcggctgccgcatggagttcctgcaacggcagctggacgac
gagggcgccaagccctgcggtcgctgcgacaactgcgcggggccccggttcaccgcggac
acctccacgaccgccgtggaggccgcgcgcacggacctggggcgggcaggagtcgcggtg
gagccgcgccggatgtggccgaccggcctgccggcgatcggcgtcgacctcaagggccgc
atcccggccggcgaacaggccgccacggggcgggcgttgggccggttgtcggacatcggc
tggggcaaccggctgcggccgatgttcgcgccccaggccccggacggcccggtgcccgac
gatgtggcgaaagcggtcgtgggggtcctggccgactgggccagggggccgggcggctgg
gcgccgggagcgccggaagcccagccgcgccccgtcggtgtcgtcaccatcgcctcccgt
tcccggccccggctggtcggctccctcggcgagcacatcgcgcgcgtgggacggctgccg
ctcctgggcacggtcgagtacaccgccggcagcggaccggtcccccggagcaacagcgcc
cagcggctcaaggtgctcgacggtgcgctgaccgtgccgcccgccctcgccgccacgctg
gccgacgtccacggaccggtgctgctcgtggacgacttcacggagaccggctggaccctc
gcggtcgtggcccgcatgctgcggcgggccggcgccgagggggtgctgcccctggtcctc
gccgtccagggctga
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