Streptomyces gilvosporeus: B1H19_17840
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Entry
B1H19_17840 CDS
T05165
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgv
Streptomyces gilvosporeus
Pathway
sgv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1H19_17840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgv03019
]
B1H19_17840
03400 DNA repair and recombination proteins [BR:
sgv03400
]
B1H19_17840
Enzymes [BR:
sgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H19_17840
Messenger RNA biogenesis [BR:
sgv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1H19_17840
DNA repair and recombination proteins [BR:
sgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1H19_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ARF55794
UniProt:
A0A1V0TS56
LinkDB
All DBs
Position
4065955..4068027
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AA seq
690 aa
AA seq
DB search
MGEADVEVVVDMETDSVSDVSEAVQVLRRVFGYDAFRGSQQEIIEHVIGGGDAVVLMPTG
GGKSLCYQIPSLVRSGVGIVVSPLIALMQDQVDALRALGVRAGFLNSTQDLEERRLVEAE
FLAGELDLLYLAPERLRVEQTLSLLDRGKISLFAIDEAHCVAQWGHDFRPDYLALSMLHE
RWPEVPRIALTATATEATHKEITARLRMEQARHFVASFDRPNIQYRIASKSEPKKQLLEL
LRGEHAGDAGIVYCLSRASVEKTAQFLVDNGIDAVPYHAGLDARMRAAHQSRFLREDGLV
VVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQR
KMIDGSEGDDAHRRRLAVHLEAMLSLCETVECRRVRLLAYFGQESGPCGNCDTCLAPPQT
WDGTVAAQKLMSTIVRLQRERRQKFGAGQIIDILMGRKTAKVIQFDHDGLSVFGVGADLR
EAEWRGVVRQLLAQGLLAVEGEYGTLVLTDTSGEVLGGRRTVAMRREPEKAPRTARSQSG
AKAKRAPVDLPAEALPVFETLRAWRGRTAKEQGVPAYVIFHDATLREIATARPTTTAALG
TVNGVGENKLAKYGQQILEVLAGEESPAPAASVPAPAAAASVPRPASGAERPPEPVWEEE
PPPEDREAPPEDEHPGAAGGVGEEYADIDW
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggcggacgtggaagtggtcgtggacatggagacggacagcgtgtcggacgtg
agcgaggcggtgcaggtgctgcgccgggtgttcgggtatgacgcgttccgtggcagtcag
caggagatcatcgagcacgtcatagggggcggggacgcggtcgtcctgatgcccacgggc
ggcgggaagtcgctgtgctatcagattccgtcgctggtcagaagcggtgtcgggatcgtc
gtctcgccgctgatcgccttgatgcaggaccaggtcgatgccctgcgggcgctgggtgtg
cgggccgggttcctcaattcgacgcaggatctggaggagcggcggctggtcgaggcggag
ttcctggccggggagctggatctgctgtatctggcgccggagcggctgcgggtcgagcag
acgctgagcctgctggaccggggaaagatctcgctcttcgcgatcgacgaggcgcactgt
gtggcgcagtgggggcacgacttccggccggactatctggcgctgtcgatgctgcacgag
cgctggcccgaggtaccgcggatcgcgctgaccgcgacggccacggaggccacgcacaag
gagatcaccgcgcggctccggatggagcaggcccggcacttcgtcgccagcttcgaccgg
cccaatatccagtaccggatcgcgtccaagagcgagcccaagaagcagctgctggagctg
ctgcgcggggagcatgccggggacgccgggatcgtgtactgcctctcccgcgcctcggtc
gagaagacggcgcagttcctggtggacaacgggatcgacgcggttccctaccacgcgggg
ctggacgcacggatgcgggcggcgcatcagtcgcggttcctgcgggaggacgggctggtg
gtcgtcgccaccatcgcgttcgggatggggatcgacaagccggacgtccggttcgtggcg
catctcgacctgccgaagtcggtggagggctactaccaggagaccggccgtgcggggcgc
gacgggcagccgtcgacggcctggctggcgtacgggctccaggatgtggtccagcagcgc
aagatgatcgacgggtcggagggggacgacgcccaccggcgccggctggccgtccatctg
gaggcgatgctctcgctgtgcgagaccgtggagtgccggcgggtgcggctgctggcctac
ttcgggcaggagagcggcccttgcggcaactgcgatacgtgtctggcgccgccgcagacg
tgggacggcacggtcgcggcccagaagctgatgtcgacgatcgtgcgcctccagcgcgag
cggcggcagaagttcggggcgggccagatcatcgacatcctgatggggcggaagaccgcc
aaggtcatccagttcgaccatgacgggctgagcgtcttcggggtcggtgccgatctgcgg
gaggccgaatggcgcggtgtggtgcggcagttgctggcccagggcctgctcgccgtcgag
ggggagtacggcacgctggtgctgacggacaccagcggtgaggtgctgggcggccggcgc
acggtggcgatgcggcgggagccggagaaggcgccgcggacggccaggtcgcagtccggg
gcgaaggccaagcgggcgccggtggatctgccggcggaggcgctgccggtcttcgagacg
ctgcgggcctggcggggccgtacggccaaggagcagggcgtgcccgcgtatgtgatcttc
catgacgcgacgctgcgggagatcgccacggcccggccgacgacgacggccgcactgggg
acggtcaacggcgtcggcgagaacaagctcgccaagtacgggcagcagattctggaggtg
ctggcgggggaggagagcccggctccggccgcgagcgtcccggccccggccgcggccgcg
agcgtcccccggccggcctcgggtgcggagcgcccgccggagccggtgtgggaggaggag
ccgccgccggaggaccgggaggccccgccggaggacgagcaccccggggcggccggtggc
gtgggagaggagtacgcggacatcgactggtga
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