Streptococcus gwangjuensis: D7D53_00180
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Entry
D7D53_00180 CDS
T06667
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgw
Streptococcus gwangjuensis
Pathway
sgw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D7D53_00180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgw03021
]
D7D53_00180 (rpoC)
03400 DNA repair and recombination proteins [BR:
sgw03400
]
D7D53_00180 (rpoC)
Enzymes [BR:
sgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D7D53_00180 (rpoC)
Transcription machinery [BR:
sgw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D7D53_00180 (rpoC)
DNA repair and recombination proteins [BR:
sgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D7D53_00180 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Dehydratase_LU
DUF6076
Motif
Other DBs
NCBI-ProteinID:
AYF96736
UniProt:
A0A387B6P7
LinkDB
All DBs
Position
35249..38932
Genome browser
AA seq
1227 aa
AA seq
DB search
MQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIR
YRGIVCDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVI
YFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLLKQVDLEKEI
AELKEELKTATGQKRVKAIRRLDVLDAFYKSGNKPEWMILNILPVIPPDLRPMLQLDGGR
FASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP
GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKP
FVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEP
VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMAYRNGYVHLHSRVGIATDSLNKPW
TEEQKHKVLLTTVGKILFNDIMPEGLPYLQEPNNANLTEGVPAKYFLPLGGDIKEAISNL
ELNPPFKKKNLGNIIAEIFKRFRTTETSALLDRMKNLGYHHSTLAGLTVGIADIPVVDDK
AEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLIANQDPKNPIVMM
MDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTD
TALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSIAEGKEMIESLEERLIGRYTK
KTVKHPETGAVIIGPNELITEEKAAEIANLKIKNEDGELVNAIEEVTIRSVFTCNTRHGV
CRHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQ
EIFEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRVEVGD
QVARGAALTEGSIQPKRLLAVRDVLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMIR
KVRVMDPGDTDLLMGTLMDINDFTDANKDVLIAGGVPATGRPVLMGITKASLETNSFLSA
ASFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEEEYLNP
PVEEEGNEETTEVVVDAAVETVEETVE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaccctagcttctccaagtaaagtccgttcatggtcttatggagaagtcaaa
aaacctgaaacaatcaattaccgtaccttgaaaccagaacgtgaaggactctttgatgaa
gttatctttggtcctacaaaagactgggaatgtgcttgtggtaagtacaaacgcattcgt
tatagagggattgtttgtgaccgctgtggggttgaagtaacgcgtacgaaagttcgtcgt
gagcgtatgggacatatcgaattgaaagctcctgtatctcacatctggtacttcaagggg
attccaagccgtatgggcttgacccttgatatgagccctcgtgccctcgaggaagttatc
tactttgcggcttatgtggtgattgatccaaaggatacaccacttgagcacaagtctatc
atgacagagcgcgaataccgtgagcgcttgcgtgagtatggttatggttcattcgttgcc
aagatgggtgccgaagccatccaagaccttttgaaacaagtagatcttgaaaaagaaatt
gctgaactcaaagaagagttgaaaacagctactggacaaaaacgtgtcaaagctatccgt
cgtttggatgttttggatgccttttacaagtctggaaacaaacctgaatggatgattctc
aacatccttccagttattccaccagatcttcgtccaatgttgcagttggatggtggccgt
tttgcctcatctgacttgaatgacctttaccgccgtgttatcaaccgtaacaaccgtttg
gctcgtttgctggagttgaatgcaccaggtattatcgttcaaaatgagaagcgtatgctt
caagaagcagttgatgctttgattgacaatggtcgtcgtggtcgtccaatcacaggacca
ggtagccgtccgcttaaatcattgagccacatgcttaaaggtaaacaaggacgcttccgt
caaaacttgctcggtaaacgtgttgatttctcaggacgttccgttatcgccgttggtcca
actcttaagatgtaccaatgtggtgtgccacgtgaaatggctattgagctctttaaacca
ttcgtgatgcgtgaaattgttgcccgtgatatcgtgcaaaacgtcaaagcggctaaacgc
ttagtggaacgcggagatgagcgtatctgggatattcttgaagaagtgattaaagaacat
ccagtacttttgaaccgtgcacctacccttcaccgtttgggtatccaagccttcgaacca
gtcttgattgatggtaaggcccttcgcttgcacccgcttgtctgtgaagcctacaatgct
gactttgacggggaccaaatggccatccacgtaccgctttcagaagaagctcaagcagaa
gctcgtatcttgatgctcgctgctgagcacatcttgaacccgaaagatggtaaaccagtt
gttactccatctcaggacatggttttgggtaactactacttgaccatggaagaagctggt
cgtgaaggtgaaggaatggtcttcaaagaccgtgatgaagctgttatggcttaccgcaat
ggttatgttcacctgcactcacgtgttggtattgcaacagacagtctcaacaaaccatgg
acagaagaacaaaaacacaaggtcttgcttacaacagttggtaaaatcctctttaacgac
atcatgccagaggggctaccatacttgcaagaaccaaacaatgccaacttgacagaaggc
gttccagctaaatacttcttgccacttggtggagatatcaaggaagcaatcagcaatctt
gaacttaaccctccattcaagaagaaaaaccttggaaatatcatcgctgaaatcttcaaa
cgtttccgtacgacagaaacttctgccttgcttgaccgcatgaagaacctcggttaccac
cactcaactcttgcaggattgacagtgggtattgccgatatcccagtcgttgatgacaag
gctgaaatcattgaagaatcacacaaacgtgtagaacaaatcacaaaacaattccgtcgt
ggtatgatcacagacgacgagcgttacaatgccgttacagctgaatggcgtgctgcccgt
gaaaaacttgagaaacgtttgattgccaaccaagatcctaagaacccaatcgttatgatg
atggactctggagcccgtggtaacatctcaaacttctcacagcttgccggtatgcgtggt
ctgatggctgctccgaacggacgtatcatggaattgccaatcctttcaaacttccgcgaa
ggtttgtcagtactcgaaatgttcttctcaactcacggtgcccgtaaaggtatgaccgat
acggcccttaagacagccgactcaggttacttgactcgtcgtttggttgacgttgcccaa
gacgttatcatccgtgaggacgactgtggaactgaccgtggtcttttgattcgctctatc
gcagaaggaaaagagatgatcgagtcgctcgaagaacgtcttatcggtcgttacactaag
aaaactgttaaacatccagaaactggtgcagttattatcggtccaaatgagttgatcaca
gaagaaaaagctgctgaaattgcaaatcttaagatcaagaatgaagatggtgaacttgta
aatgcaatcgaagaagtgactatccgctctgtatttacatgtaacactcgtcatggtgtc
tgtcgtcactgttatggtatcaacttggcgactggtgatgcggttgaagttggtgaagca
gttggtacaatcgctgcccaatctatcggggaacctggtacacagcttacaatgcgtacc
ttccacacgggtggggttgcctcaaataccgatatcactcagggtcttcctcgtgtccaa
gaaatctttgaagcccgcaatcctaaaggggaagcggttatcacagaggttaaaggacaa
gttacagctatcgaagaagatgcatcaactcgtaccaagaaagtctttgttaaaggtgaa
actggcgaaggtgaatatgtcgttccatttacagctcgtatgcgtgttgaagttggggac
caagtagcgcgtggtgccgctcttacagaaggttctatccaaccaaaacgtctccttgca
gtccgtgatgtcttgtcagttgaaacttaccttctcggtgaagtacaaaaagtttaccgt
agccaaggggtagaaatcggtgacaaacacatcgaggtaatggttcgtcaaatgattcgt
aaagtccgtgtcatggatccaggtgacacagatcttctcatgggtacccttatggatatc
aatgactttacagatgccaacaaagatgtccttatcgcaggtggagttccagcgactggt
cgaccagtccttatgggaattaccaaagcctcacttgaaaccaacagtttcttgtcagcg
gcttccttccaggaaacaactcgtgtccttactgatgcggctatccgtggtaagaaagat
catctccttggacttaaagaaaatgttatcatcggtaagatcatcccagcaggtactggt
atggcccgttaccgtaaccttgaaccacaagctatcaacgaagaagaataccttaatcct
ccagtagaggaagaaggaaatgaagaaacaacagaagtagttgtggatgctgccgttgaa
actgtggaagaaacagtagaataa
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integrated database retrieval system
