Streptomyces gardneri: H4W23_02110
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Entry
H4W23_02110 CDS
T07252
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00061
Fatty acid biosynthesis
sgx00071
Fatty acid degradation
sgx01100
Metabolic pathways
sgx01212
Fatty acid metabolism
sgx02024
Quorum sensing
sgx04146
Peroxisome
Module
sgx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H4W23_02110
00071 Fatty acid degradation
H4W23_02110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H4W23_02110
09145 Cellular community - prokaryotes
02024 Quorum sensing
H4W23_02110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgx01004
]
H4W23_02110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgx04147
]
H4W23_02110
Enzymes [BR:
sgx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H4W23_02110
Lipid biosynthesis proteins [BR:
sgx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H4W23_02110
Exosome [BR:
sgx04147
]
Exosomal proteins
Exosomal proteins of breast milk
H4W23_02110
Exosomal proteins of breast cancer cells
H4W23_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPK43536
LinkDB
All DBs
Position
complement(425244..427130)
Genome browser
AA seq
628 aa
AA seq
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MSSAQYLLESRPHSVAHLFLSRVEATPDREAYRHPVAADHSAPGAEEWRSLTWAQTAERV
KAIAAGLLSLGLRPEERVAISSSTRIEWILADLGVMCAGTAATAVYPSTNAEETAYILAD
SGSRAIFVENAAQLAKVTAHAEGLPGLDHAILFDAETDTPRVKGLEVLTLAELEERGAAY
LREHPDAIDTTVQAIERDQLATLIYTSGTTGRPKGVRLVHDCWSYQAVAQEVSGLLLPDD
VQFLWLPLSHVFGNALISGQVRTGSVIAVDGRVDRIVTNLPLVRPTVMASAPRIFEKVYN
GIAARARAEGGAKYKIFQWAAKVARDYARTGQEQLVATGSRKVPLSLTVQHAVADKLVYG
KIRAAFGGELRGSASGSAALAADIGYFFAGAGVPVLEGYGLTETSAAVTVNPVDDFRVGT
VGRPLPGTEVRIAEDGEILLKGPGVMRGYHNLPEKTAEVLESDGWFHTGDIGEVDKDGFV
RITDRKKDLFKTSGGKYIAPTEIESRFKAVCPYVSNILVIGNGRNYCTALITLDESAIMP
WAASHDLEGHSYAEAVSAPEVHALIEGFVQRVNGDLQRWQTIKKFSVLPRDLDVEHGELT
PSLKVKRPVVEREYAEVIETMYEGAREV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgcgcagtaccttctcgaaagccgcccgcactcagtggcgcacctcttcctc
tcacgggtcgaggccacgcccgaccgtgaggcctaccgccatccggtggcggccgaccac
agtgctcccggcgccgaggagtggcgctccctgacatgggcccagaccgcggagcgcgtg
aaggcgatcgcggccggcctgctctccctcgggctgcggcccgaggagcgggtggccatc
tcctcctcgacccggatcgagtggatcctcgccgatctgggggtgatgtgcgcgggcacc
gccgcgaccgccgtctacccgagcaccaacgccgaggagacggcgtacatcctcgccgac
tccggcagtcgggcgatcttcgtcgagaacgccgcccagctggccaaggtgaccgcccac
gcggagggcctgcccgggctcgaccacgcgatcctcttcgacgcggagacggacacgccc
cgcgtcaagggccttgaggtactgaccctcgccgagctggaggagcgcggcgccgcgtac
ctgcgggagcacccggacgcgatcgacacgacggtccaggccatcgagcgggaccagctc
gccaccctgatctacacctcgggcacgaccggccgcccgaagggcgtgcgcctggtgcac
gactgctggtcctaccaggccgtcgcgcaggaggtcagcgggctgctgctccccgacgac
gtgcagtttctgtggctgccgctgtcccatgtcttcggcaacgccctgatatccggtcag
gtgaggaccggaagcgtgatcgcggtggacgggcgcgtcgatcgcatcgtcaccaacctg
cccctcgtccggcccaccgtgatggcctccgcaccgcggatcttcgagaaggtctacaac
ggcatcgcggccagggcgagggccgagggcggcgccaagtacaagatcttccagtgggcg
gcgaaggtcgcccgcgactacgccaggaccgggcaggagcagctggtggcgacgggaagc
cgcaaggtgccgctgtcgctcaccgtgcagcacgccgtggccgacaagctggtctacggc
aagatccgtgccgccttcgggggcgaactccgcggcagcgcgtcgggaagcgccgcactc
gccgccgacatcggctacttcttcgccggcgccggcgtgcccgtcctcgaaggctacggg
ctgacggagaccagcgccgccgtcacggtcaacccggtcgacgacttccgggtgggcacg
gtcggcaggcccctgcccggcaccgaggtccgtatcgccgaggacggggagatcctcctg
aagggccccggcgtcatgcgcggctaccacaaccttccggagaagaccgccgaagtgctg
gagagcgacggctggttccacaccggtgacatcggcgaggtcgacaaggacggcttcgtc
cggatcaccgaccgcaagaaggacctgttcaagacctcgggcggcaagtacatagcgccc
acggagatcgagagccgcttcaaggccgtctgtccgtacgtcagcaacatcctggtcatc
ggcaacggacgcaactactgcaccgccctgatcacgctcgacgagagcgcgatcatgccc
tgggcggcatcccacgacctggagggccacagctacgccgaggccgtctccgcgccggaa
gtgcacgcgctgatcgagggcttcgtccagcgcgtcaacggcgacctgcagcggtggcag
acgatcaagaagttctcggtgctgccgcgcgacctcgacgtcgagcacggcgagctcacc
ccgagcctcaaggtcaagcggcccgtcgtggagcgcgagtacgccgaggtcatcgagacg
atgtacgagggcgcccgcgaggtgtga
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