Streptomyces gardneri: H4W23_03745
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Entry
H4W23_03745 CDS
T07252
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgx03016
]
H4W23_03745
Enzymes [BR:
sgx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
H4W23_03745
Transfer RNA biogenesis [BR:
sgx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
H4W23_03745
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QPK43815
LinkDB
All DBs
Position
complement(791836..792513)
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AA seq
225 aa
AA seq
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MVTAGGHTGGTGPAASGPKRPPRAAAHHGGVDTDIPHGDSGERPGVLGSPPTPRTAVAWL
PPAELWPAIQRIREVHDRQIGRWPPHVNLLFGFVPEADFDRAVPLLAAAVAEVAPFTARL
SGVRSFGHRHDATLWLDPAAAGPEPWEALYDALLRRFPRCQGRAAGFTPHLSLGRSRTPR
RIAPELAGRLGTMPARVEEVVVLSRREDGPMRPRLVFGLGTGDVR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaccgcgggcggacacaccgggggaacggggccggccgcttcaggaccgaagcgg
ccgccccgggccgcggcgcaccatggtggtgtggacacggacatcccgcacggcgacagc
ggcgagcggcccggtgtgctcggcagcccgccgacgccccgcaccgccgtggcgtggctc
ccgccggcggagctgtggcccgcgatccagcggatccgcgaggtgcacgaccggcagatc
ggtcgctggccaccgcacgtgaacctgctcttcggattcgtcccggaggcggacttcgac
cgggcggttccgctgctggccgccgccgtggccgaggtcgcgccgttcaccgcccggctc
agcggtgtgcgcagcttcgggcaccgacacgacgccaccttgtggctcgatccggcggcg
gccggccccgagccctgggaggcgctgtacgacgcgctgctacgacgcttcccccgctgc
cagggccgcgccgccggtttcaccccgcacctctcgctgggccggagtaggactccgcgc
cgaatcgcccccgagctggccggtcggctgggcacgatgccggcccgcgtcgaggaggtc
gtcgtgctgtcgcgccgggaggacggtcccatgcggccccgactcgtcttcgggctcggg
acgggcgacgtacggtga
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