Streptomyces gardneri: H4W23_05625
Help
Entry
H4W23_05625 CDS
T07252
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4W23_05625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_05625
Enzymes [BR:
sgx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H4W23_05625
DNA repair and recombination proteins [BR:
sgx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4W23_05625
Prokaryotic type
H4W23_05625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SPMIP5
Motif
Other DBs
NCBI-ProteinID:
QPK44139
LinkDB
All DBs
Position
complement(1247399..1248076)
Genome browser
AA seq
225 aa
AA seq
DB search
MTARPLNELVEPGWAEALSPVAGRVAEMGDFLRAEIAAGRTYLPSGPNVLRAFQQPFDDV
RVLIVGQDPYPTPGMAIGLSFAVAPEIRSLPGSLENIYRELNTDLGLPRPSNGDLTPWTR
QGVLLLNRALTTAPRKPAAHRGKGWEEVTEQAIRALAARGKPLVSILWGRDARNARPLLG
NLPAIESAHPSPMSADRGFFGSRPFSRANELLLDQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcgacccttgaacgaactggtggagcccggctgggcggaggctctgagcccc
gtcgcgggacgtgtggcggagatgggcgacttcctgcgcgcggagatcgccgcgggccgg
acgtacctgccgtccggtccgaacgtcctgcgggccttccagcagcccttcgacgacgtg
cgggtcctgatcgtgggtcaggacccctacccgacgccggggatggcgatcgggctcagc
ttcgcggtcgctccggagatccgctcgctgccgggcagcctggagaacatctaccgcgag
ctgaacaccgacctgggtctgcccaggccgtcgaacggcgacctgaccccctggacccgc
cagggcgtcctgctgctcaacagggccctgaccacggccccgcgcaagccggccgcccac
cgcggcaagggctgggaagaggtgaccgagcaggccatccgcgccctggccgcccggggc
aagccgctggtgtccatcctgtggggccgggacgcccggaacgcccggccgctcctcggg
aacctcccggcgatcgagtcggcgcacccgtccccgatgtcggcggaccggggcttcttc
ggctcccgccccttcagccgcgccaacgaactcctcctggaccagggcgcccagcccgtg
gactggcgcctgccctga
DBGET
integrated database retrieval system
