Streptomyces gardneri: H4W23_06265
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Entry
H4W23_06265 CDS
T07252
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_06265
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4W23_06265
Archaeal homologous recombinant proteins
H4W23_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QPK44252
LinkDB
All DBs
Position
complement(1398792..1399970)
Genome browser
AA seq
392 aa
AA seq
DB search
MRLLHTSDWHLGRSFHRVGLLEAQAAFLDHLVATVHAHRVDAVLVSGDVYDRAVPPLPAV
ELFDTALHRLAEAGVPTVMISGNHDSARRLGVGAGLIERAGIHLRTDPAGIGTPVVLTDA
HGDIALYGLPYLEPALVREQLGAAKGGHEAVLAAAMDRVRADLAARPAGTRSVVLAHAFV
AGGAPSDSERDITVGGVAAVPAGVFDGVDYVALGHLHGSQTLTPRVRYSGSPLAYSFSEA
DHRKTMWLVDLGPSGPDGAITGAERLDCPVPRPLARIRGRLDDLLADPALAPHEQSWVEA
TLTDPARPAEPMARLAERFPHTLNLVFDPERTEDGPGASYAQRLRDRSDQQIAEDFVAHV
RGGEGLDGPERTVLYGAFDDVRVDSAEREVGR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctcctgcacacctcggactggcatctcggccggtccttccaccgcgtcgggctc
ctcgaagcccaggccgccttcctcgaccacctcgtggcgacggtccacgcgcaccgcgtg
gacgccgtcctcgtctccggggacgtctacgaccgggccgtgccgccgctgcccgccgtc
gagctcttcgacacggccctccaccgcctcgccgaggccggggtgcccaccgtcatgatc
tccggcaaccacgactcggcccgccgcctcggcgtcggcgcggggctcatcgagcgggcg
ggcatccacctccgtaccgacccggccggcatcgggacccccgtcgtcctcaccgacgcc
cacggcgacatcgcgctctacggcctgccgtacctcgaacccgccctcgtgcgcgaacag
ctcggcgcggcgaagggcgggcacgaggccgtgctcgccgccgccatggaccgggtgcgc
gccgacctcgcggcccgccccgccggcacccgctccgtcgtcctcgcccacgccttcgtg
gccggcggcgcccccagcgacagcgagcgggacatcaccgtcggcggtgtcgccgccgtc
cccgccggcgtcttcgacggcgtcgactacgtcgcgctcggccacctccacggcagccag
accctcaccccgcgggtgcgctactccggctccccgctcgcgtactccttctccgaggcc
gaccaccgcaagacgatgtggctcgtcgacctcggcccgagcggccccgacggggcgatc
accggcgccgagcgcctcgactgccccgtcccgcgccccctcgcccggatccggggacgg
ctcgacgacctccttgccgaccccgcgctcgcgccccacgagcagtcctgggtcgaggcc
accctcaccgaccccgcacggcccgccgagcccatggcccggctcgccgagcgcttcccg
cacaccctgaacctcgtcttcgaccccgagcggaccgaggacggccccggcgcctcctac
gcccagcggctccgggaccgcagcgaccagcagatcgcggaggacttcgtggcccatgtg
cgcggcggcgaggggctcgacggcccggagcggacggtgctgtacggcgccttcgacgac
gtacgggtcgactcggccgagcgcgaggtgggccggtga
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