Streptomyces gardneri: H4W23_07680
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Entry
H4W23_07680 CDS
T07252
Symbol
cobT
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00860
Porphyrin metabolism
sgx01100
Metabolic pathways
sgx01240
Biosynthesis of cofactors
Module
sgx_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
H4W23_07680 (cobT)
Enzymes [BR:
sgx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
H4W23_07680 (cobT)
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Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Nitroreductase
Motif
Other DBs
NCBI-ProteinID:
QPK44499
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Position
complement(1702860..1706519)
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AA seq
1219 aa
AA seq
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MTDTGQVSGEGLPENAGMVEQPGIPAPGAYTFLDPSEHAAEDDDILLMPGAQGAWSEHPP
GVAPAPPVAVPAPLAPPVVPHQGAAPVTAAPPAAPEATAPMGDPLTDPLTGPLPEPFVLA
DVLTAPQGQTPPQAQTTGTPAHGTPVHGTPAHGMPAQGTPAHGAPVAAQEPVLADHGYEP
GILDTGAHEAAGRDTGSVDLGGVRVPPPVGAPTPPPARRPLHMGPPVPEVTGGVVLSLAD
RGPAAAPAQAPQPAPVVATGPAPMPVRNPGPPTTGPEYFDIPQDQQLAPQGAEPWAAQPQ
EAVAPEPVLPAETVVPPTGQFVQVEGSVPTAPHLAPTPAEEPVEAVAAPVTPVAVAPEAP
AEEEPVAAPEPEPAEAQATVPAPREAEPAAEAPAPAPEAEVLPEPVVEIPAEPAVETVVV
AEAPVEQAPVETPVVAEAAPEPLPEQAPAAEAQAEAEVQAEAAAAVEPVTSEESEQPVAA
EPTDTVAAQPEAVTEAETDPEGFVDAAELVEADELPATDETVVPAEPLVATAELPTTDGL
PATDEAAAVPAELSATAEVPATAEVPATAELPATDEPAVTEEEPVADEPAVTEEEPVADE
PVVTEELTGTDDLPATEEPTATEEPILAEELVVTDEDPAVAPTAPAPGYDDAEREAVLRV
MRERRDIRNGFRSDPIPHEVLLRVLEAAHTAPSVGHSQPWDFVVIRSAETRQTMHELAQR
QREAYAKSLPKARAKQFKELKIEAILDTPVNIVVTADPTRGGRHTLGRYTQPQMAPYSSA
LAVENLWLAARAEGLGVGWVSFFDEREMVRTLGLPEHLEVVAYLCVGYVDEFPDEPELAQ
AGWSKRRPLAWVVHEETYGRRALPGEEPHDLLQETVANIRPLDAKALGEAWERQKRMTKP
AGALGMLEIISAQLSGLSRVCPPPIPEPAAVAIFAGDHGVHAQGVTPWPQEVTGQMVANF
LGGGAVCNAFANQVGAEVCVIDVGVASELPATPGLLPRKVRPGTGDFTTGLAMTRDEVLA
AIEVGIETARDLVAAGNKAILTGEMGIANTTASAALISVYTGVDAAEVTGRGTGINDETH
ARKVDVVRRALDLHKPDPADPIGVLSAIGGLEHAALVGLILGAASLRTPVILDGVSTGAA
ALVARAIAPESLAACIAGHRSAEPGHVAALNKLGLRPLVDLDLRLGEGTGALLALPLVQS
AARAMHEVATFDSAGVTEK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccggccaggtctcgggcgagggactgccggagaacgcaggcatggtcgag
cagccgggcatccccgcaccgggcgcgtacaccttcctggacccctccgagcacgcagcc
gaggacgacgacatccttctcatgccgggcgcccagggtgcctggagcgagcacccgccg
ggcgtggcacccgcgccgccggtggccgtaccggccccgctcgcgccccctgtggtcccg
caccagggcgccgcgcccgtgactgccgctccgccggcggccccggaggcgacagccccg
atgggcgacccgctcacggaccccctcacgggcccgctcccggaacccttcgtcctcgcc
gacgtgctgaccgctcctcagggccagacgccgccgcaggcgcagaccaccggtaccccg
gcgcacgggaccccggtgcacggcactcccgcgcacggcatgcccgcccagggcaccccg
gcgcacggcgcccccgtcgccgcgcaggagcccgtcctcgccgaccacggctacgagccc
ggcatcctcgacaccggcgcccacgaggccgcgggccgtgacaccggctccgtcgacctc
ggcggcgtccgcgtcccgccgcccgtcggcgccccgaccccgccgcccgcccggcgcccg
ctgcacatgggcccgcccgtgcccgaggtcaccggtggcgtcgtgctgtcgctcgccgac
cgcggcccggccgccgcgcccgcccaggctccgcagcccgcgccggtcgtggccaccgga
cccgcgccgatgcccgtgaggaacccgggaccgccgacgacgggccccgagtacttcgac
atcccgcaggaccagcagctcgcgccgcagggcgccgagccgtgggccgcgcagcctcag
gaggccgtggcgcccgagccggtcctccccgcagaaacggtcgtcccgccgaccggacag
ttcgtccaggtcgagggttccgtcccgacggccccgcacctggccccgacgccggccgag
gagcccgtcgaggccgtggcggcccccgtgacccccgtggccgtggcccccgaggcaccg
gcggaggaggagcccgtcgcggcccccgagccggagccggccgaggcccaggccaccgtg
cccgcgccgcgcgaggccgagcccgccgccgaggcccccgcgcccgcgcccgaggcagag
gtcctgccggagcccgtcgtggagatcccggccgagccagccgtcgagaccgtcgtcgtg
gccgaggctccggtcgagcaggccccggtggagacccccgtcgtggccgaggccgccccc
gagcccctgcccgagcaggcccccgcagcagaggcgcaggccgaggcagaggttcaggct
gaggcggcggcagcggtcgaacccgtgacgtccgaagagtcggagcagcccgtcgccgcc
gagcccaccgacacggtggcggcacagcccgaggccgtgaccgaggcggagacggacccc
gagggcttcgtggacgccgcggaactggtcgaggccgacgaactccccgccaccgacgaa
accgtcgtcccggccgagccgctcgtggccacggccgaactcccgacgaccgacggactt
ccggccaccgacgaagccgccgctgttccggccgaactctcggccacggccgaagtcccg
gccacggccgaagtcccggccacggccgaactccccgccaccgacgagcccgccgtcacc
gaggaggagccggtggccgacgagcccgccgtcaccgaggaggagccggtggccgacgaa
cccgtcgtcaccgaagagctcaccggcacggacgaccttccggccaccgaggagccgacc
gccaccgaggagccgatcctcgccgaggaactcgtcgtcaccgacgaggacccggcggtc
gcccccaccgccccggcgcccggctacgacgacgccgagcgcgaggccgtcctgcgcgtg
atgcgcgagcgccgcgacatccgcaacggcttccgctccgacccgatcccgcacgaggtg
ctgctccgcgtcctggaggccgcccacacggcccccagcgtcggccactcgcagccctgg
gacttcgtcgtcatccgctccgccgagacccggcagacgatgcacgagctggcccagcgg
cagcgcgaggcctacgccaagtcgctgccgaaggcccgggccaagcagttcaaggaactg
aagatcgaggccatcctcgacaccccggtcaacatcgtcgtgaccgccgaccccacccgg
ggcggccgccacaccctgggccgctacacgcagccgcagatggccccgtactcctccgcg
ctcgccgtcgagaacctctggctcgccgcccgcgccgagggcctcggcgtcggctgggtc
agcttcttcgacgagcgcgagatggtccgcaccctcggcctgcccgagcacctcgaagtg
gtcgcgtacctctgcgtcggttacgtcgacgagttccccgacgagcccgagctggcccag
gcgggctggtccaagcgccgcccgctggcctgggtcgtccacgaggagacgtacggccgc
cgcgccctgcccggcgaggagccgcacgacctcctccaggagaccgtcgccaacatccgc
ccgctggacgccaaggcgctcggcgaggcctgggagcgccagaagcgcatgaccaagccc
gcgggcgccctgggcatgctggagatcatctccgcgcagctctccggcctctcccgggtc
tgccctccgccgatcccggagcccgcggccgtggcgatcttcgccggcgaccacggggtc
cacgcccagggcgtcacgccctggccgcaggaggtcaccggccagatggtggccaacttc
ctcggcgggggagcggtctgcaacgccttcgcgaaccaggtcggcgccgaggtctgcgtc
atcgacgtgggcgtcgcctccgagctcccggccacccccggactccttccccgcaaggtc
cgcccgggcaccggcgacttcaccacgggtcttgcgatgacccgcgacgaggtcctggcg
gcgatcgaggtgggcatcgagacggcccgcgacctcgtggcggcgggcaacaaggcgatc
ctcaccggcgagatgggcatcgcgaacaccaccgcgtccgccgcgctcatctccgtgtac
accggggtggacgccgccgaggtcaccggccgcggcacgggcatcaacgacgagacgcac
gcccgcaaggtggacgtggtccgccgcgccctcgacctgcacaagccggacccggcggac
ccgatcggcgtcctctcggcgatcggcggcctggagcacgcggccctcgtcggcctgatc
ctgggcgcggcctcgctgcgcaccccggtgatcctggacggcgtctcgaccggcgcggcg
gccctggtggcccgcgcgatcgccccggagtcgctcgcggcctgcatcgccggccaccgc
agcgccgagccgggccacgtggcggccctgaacaagctgggcctgcgcccgctggtggac
ctggacctccgcctgggcgaaggtacgggcgcactcctcgccctgcccctggtgcagagc
gcggcccgcgcgatgcacgaggtggccacgttcgactcggccggagtcaccgagaagtag
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