Streptomyces gardneri: H4W23_08095
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Entry
H4W23_08095 CDS
T07252
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sgx03051
]
H4W23_08095 (pafA)
Enzymes [BR:
sgx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
H4W23_08095 (pafA)
Proteasome [BR:
sgx03051
]
Prokaryotic proteasome
Bacterial regulatory particles
H4W23_08095 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
QPK44571
LinkDB
All DBs
Position
complement(1793962..1795323)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEVQREYYEKAVDFVDRRGIRSGTV
AQVLELWGRTLDAIESERLDRIETEIDWVMKHRLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLYYLLQKNGQAARICNDMKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgacgaagtggcgcgctacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctgtacctggacgtgggttcg
catccggaatacgcaacaccggaatgtgacgacgtgaccgaactggtcacccacgacaag
gcaggcgagcgcattctcgagggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactcggccggaaactcctac
ggctgccacgagaactatctcgtcgcccgccacggggagttctcccggctcgcggacatc
ctcattcccttcctcgtcacccggcagctcatctgcggtgcgggaaaggtcctccagacc
ccgcgtggcgcggtcttctgcgtctcccagcgtgccgagcacatctgggagggcgtcagc
tccgccacgacccgctcacggcccatcatcaacacccgggacgagccgcacgcggacgcc
gagcgctaccgccgcctccacgtcatcgtcggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctggtgctccgcatgatcgaggccggcaccgtgatg
cgcgacctgaccctggagaaccccatccgggccatccgcgaggtcagtcacgacatcacg
ggccagcgcaaggtcaggctcgccagcggccgcgaggcctccgccctggaggtccagcgc
gagtactacgagaaggccgtcgacttcgtcgaccggcgcggcatccgctccggcaccgtc
gcacaggtcctggagctgtggggccgtacgctcgacgcgatcgagagcgagcggctcgac
cgcatcgagaccgagatcgactgggtcatgaagcaccggctcatcgagcgctaccgggcc
aagcacaacatgaccatgtcgaacccgcgcgtcgcgcagatagacctcgcgtaccacgac
atccaccgccgacgcgggctctactacctgctgcagaagaacggccaggcggcccggatc
tgcaacgacatgaagatcttcgagggcaagtcggtgcccccgcagaccaccagggcgcga
ctccgcggcgacttcatccgccgcgcacaggagcagcgccgggacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgaaccgtgttgtgcaaggacccgttccgc
tccgtcgacgaccgggtggaaaagctgatcgccggaatgtag
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