Streptomyces gardneri: H4W23_08530
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Entry
H4W23_08530 CDS
T07252
Name
(GenBank) RICIN domain-containing protein
Organism
sgx
Streptomyces gardneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RicinB_lectin_2
Ricin_B_lectin
PT-HINT
Hint
Hom_end_hint
Vint
Intein_splicing
CDtoxinA
Motif
Other DBs
NCBI-ProteinID:
QPK50414
LinkDB
All DBs
Position
complement(1887992..1892899)
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AA seq
1635 aa
AA seq
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MLIPGSRLSAILTPLTTSVVGLAVLGGMAVQPGTVAPRMATVGNDYDWYDDTAAEQLRQD
QCLMAEVLRMGGPAMGAVAKGGLDLPPEGLHTAADRKYWQDTPLATAFKQDKAAADKELA
DIYALRESWKKPVYGLTTPAGINDATFHWPPGIREGEDFHTQTGLTKWIADRYWKDEGDF
YVDPTPKADEKTRKAVTDLGTPLYGTPPNPQTSTDWYRDGAEHEGFKWLKEATFEPTGTD
NARLFLAAGGFPRKAPTPGTAEFRIAVEDMKTRYSTCAWRDAIDPNKVLGPVAETAAAEW
QQEITAQAAQRNRVVSASVSATKALATGSRALGQMLGHSWVADHLTRWQDHWSAGGVGWI
GDAESTIELKAAPGKCLESQGGGTANGTPVQVYTCNGGAGQKWRMEGDDHGLHLRNVKSM
TCLDVAGGGTAVGTKIQLSTCNSSPGQTWAYTPRATTALKGVGSGKCLNFPTYDLGKDAL
LATCNSTGPQQLTIKPSGNKGEVQPKAHFDQATKGIADARAGAKAQLLVIKQQAAAVAAA
VAASDAAEKAAYDIADAQGVPRGRGMLVGLQKAQVTKGISAALTAMVKAGETAEAATRAA
AADSETIAQRALAQASLSKAEFRKEAAHAAELQAKAAADGAKYQRDTAKKEKENAEAKLA
VALKAEADAKAAAADAHARRLSAEAEEKTAEKEKLTAVAKQGEAAQHRKNAEAEAVKAQD
AKKLAESAEGTAVEKKNAAVKAKDKARELRDDAWAAEQRADAARAKADAKEAYAQAHKAD
EHAQASREAADTADTHADAAEAAAGRARGEADAATEAAAEADAAADRAEAAASRARADAD
AAQAAKLRSEAAVATATSAVADALEASKRAADAAKTALQLADEAEAKAKEAKTHADEANK
EAGKALAAAAEAAGFAHVTAQAAVDAGNSAAQVAQPANDAIQLGSPYVTTDAAAGLVVLT
GQASKTIAEQQKAVADTHAANAKDEAAAAKAIADAATGEAKQAYVHAANAAAHAADARTY
AKEALGYAADAARTAAKAAESLARTVEWDRQAGVDAEAADKAAGRAEGHARSARESADQA
ALDAQGARDAAAAAEQAAKDARAAADRADAAATQAEEAAKDALRYAKEAQQAAESAARKQ
ANQQIADGAGTGGVGGTFFVVDESTLNVTDSKQRAPCVLEPGWIGCTVTFDVTFDVEVDF
FMCTNPNVPATAAGCPSEDTLQLQRQSFKGLKKEVTRYFSKWDLIQETIVYKVLKAALLQ
DFIDCWKGSAGGCAWAASNFIPGKAFAKVGEAITALHAALNTGIGVRDAFNTLKALDGLD
PATLVRLENTVNLYEDLLTSCKINSFPGTTRVLMADGSHKPIADVRVGDRVLAADPDSGE
RRSQTVSATYAHDTDRLVDITFADGSVLTSTAGHRVYVEGRDWTLVSELSTGDALRAPDG
SLLAVTGLRDRAGLAPREVHDLTVEGLHTFYVRAEGQRAKDLLVHNCAKLTDELEFPRSG
AHTLSRHVDPTPAEAKAFAIENGRKGLAPVSSVWTNQDVAQDAVNAVIQYYFFPQGNRRE
ASFTAFDNFLHKRGQWRNKDEFPIFGTYDGHSPLGKIYDDQGNWTEASNRVKVVLKRLPR
QDGHDGFIVFTAHPL
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgctcatacccggatcacggttgtccgcgatcctcacccctctcaccacctccgtggtg
ggcctcgccgtgctcggcggcatggcggtccagcccggcaccgtcgccccgcgcatggcc
accgtcggcaacgactacgactggtacgacgacacggcggccgagcaactgcggcaggac
cagtgcctgatggccgaggtcctgcgcatgggcggacccgccatgggggccgtcgccaag
ggcgggctcgacctgccgcccgagggcctccacaccgcggccgaccgcaagtactggcag
gacacgccgctcgccacggcgttcaagcaggacaaggccgccgccgacaaggaactggcg
gacatctacgccctccgcgagagctggaagaagcccgtgtacgggctgaccactccggcg
ggcatcaacgacgccaccttccactggccgcccggcatcagagagggcgaggacttccac
acccagaccggcctgaccaagtggatcgccgaccggtactggaaggacgagggcgacttc
tacgtcgatcccacgccgaaggccgacgagaagacccgcaaggccgtcaccgacctcggc
acccctctctacggcacccctcccaacccgcagaccagcaccgactggtaccgcgacgga
gccgagcacgagggcttcaagtggctgaaggaagccaccttcgagcccaccggcaccgac
aacgcccggctcttcctcgccgccggcggcttcccccgcaaggcccccaccccggggacc
gcggagttccgcatcgccgtcgaggacatgaagacccgctactcgacctgcgcctggcgc
gacgcgatcgacccgaacaaggtcctcggccccgtcgccgaaacggccgccgccgagtgg
cagcaggagatcaccgcccaggccgcccagcggaaccgggtcgtcagcgcgagcgtgagc
gccaccaaggcgctcgccaccggctcgcgggcgctcggccagatgctcggccactcgtgg
gtcgccgaccacctcacccgctggcaggaccactggtccgcgggcggcgtcggctggatc
ggtgacgccgagtcgacgatcgagctcaaggccgcaccgggcaagtgcctggagtcccag
ggcggcggaaccgccaacggcaccccggtccaggtctacacctgcaacggcggcgccggg
cagaagtggcggatggagggcgacgaccacggtctgcacctgcgcaacgtcaagtccatg
acctgcctcgacgtcgcgggtggcggcacggccgtcggcacgaagatccagctctccaca
tgcaacagctccccggggcagacctgggcctacaccccccgcgccaccaccgcgctgaag
ggcgtcggctcgggcaagtgcctgaacttcccgacgtacgacctcggcaaggacgcgctg
ctcgccacctgcaacagcaccggcccgcagcagctcaccatcaagccctccggcaacaag
ggcgaggtgcagcccaaggcccacttcgaccaggccacgaagggcatcgcggacgcccgg
gcgggcgcgaaggcccagctgctggtcatcaagcagcaggccgcagccgtcgcggcggcc
gtggccgcctccgacgccgccgagaaggccgcgtacgacatcgccgacgcccagggagtt
ccgcgcggccgcggcatgctggtgggtctgcagaaggcccaggtcaccaagggcatctcc
gccgcgctcaccgcgatggtgaaggccggcgagaccgccgaggccgccaccagggccgcc
gccgcggacagcgagacgatcgcgcagcgcgccctcgcccaggcctccctgtcgaaggct
gagttccgcaaggaggcggcccacgccgccgagctccaggccaaggccgccgcggacggg
gccaagtaccagcgcgacacggccaagaaggagaaggagaacgccgaggccaagctcgcc
gtcgccctgaaggcggaggccgacgcgaaggccgccgcggccgacgcccacgcccgcagg
ctgtcggcggaggcggaggagaagaccgccgagaaggagaagctgaccgccgtcgccaag
cagggcgaggcggcccagcaccgcaagaacgccgaggcggaggcggtgaaggcgcaggac
gccaagaagcttgccgagtccgccgagggcaccgcggtcgagaagaagaacgccgcggtg
aaggccaaggacaaggcccgcgagctgcgggacgacgcctgggccgccgagcagcgggcc
gacgccgcccgcgccaaggccgacgccaaggaggcctacgcccaggcgcacaaggccgac
gagcacgcccaggcctcccgcgaggccgccgacaccgcggacacgcacgccgacgccgcc
gaggcggcggcgggccgggcccgcggcgaggccgacgcggcgacggaggcggccgccgag
gcggacgccgccgccgaccgtgccgaggcagccgcgagccgggcccgcgccgacgcggac
gcggcccaggccgccaagctccggtccgaggccgcggtggccaccgcgaccagcgccgtg
gccgacgccctggaggcctcgaagcgtgccgccgacgcggcgaagaccgcgctgcagctc
gccgacgaggcggaggccaaggccaaggaggccaagacccacgcggacgaggcgaacaag
gaggccggcaaggccctggccgccgccgccgaggccgccggcttcgcgcacgtcacggcc
caggccgctgtcgacgcggggaactccgctgcgcaggtcgcccagcccgccaacgacgcg
atccagctcggttccccgtacgtcacgaccgacgcggccgccggcctggtcgtcctgacc
ggccaggcgtcgaagacgatcgccgagcagcagaaggctgtcgccgacacccacgccgcg
aacgcgaaggacgaggcggccgccgccaaggccatcgcggacgcggccaccggcgaggcc
aagcaggcctacgtgcacgccgccaacgccgccgcccacgcggccgacgcgcgcacctac
gccaaggaagcgctcgggtacgcggccgacgccgcccggaccgcggccaaggcggccgag
tccctggcccgtacggtcgagtgggaccgccaggccggcgtggacgccgaggccgccgac
aaggcggccgggcgcgcggagggccacgccaggtccgcccgcgagtccgccgaccaggca
gctcttgacgcccagggcgcccgcgacgcggcagccgccgccgagcaggccgccaaggac
gcccgagcggcggccgaccgcgccgacgccgccgcgacccaggccgaggaagcggccaag
gacgcgctgcggtacgccaaggaggcacagcaggcggccgagtccgccgcccgcaagcag
gccaaccagcagatcgcggacggcgcgggcacgggcggggtcggcggcacgttcttcgtc
gtcgacgagagcaccctcaatgtgaccgactccaagcagcgggctccctgcgtcctggag
cccggctggatcggctgcacggtcaccttcgacgtcacgttcgacgtcgaggtcgacttc
ttcatgtgcaccaacccgaacgtgccggccacggccgcgggttgcccgtccgaggacacc
ctgcagctccagcggcagtcgttcaagggactgaagaaggaggtcacccgctacttcagc
aagtgggacctcatccaggagacgattgtctacaaggtcctcaaggccgccctgctccag
gacttcatcgactgctggaagggcagcgccggcggctgcgcctgggccgcgagcaacttt
atccccggcaaggcgttcgccaaggtcggagaggcgatcaccgccctccacgccgcgctg
aacaccgggatcggcgtccgggacgcgttcaacacgctcaaggcgctcgacgggctggac
ccggcgaccctcgtgcggctcgagaacacggtcaacctctacgaggacctgctgacgtcc
tgcaagatcaacagcttcccgggaaccacccgggtgctgatggcggacggcagccacaag
ccgatcgccgacgtgcgcgtcggcgaccgcgtcctcgcggcggacccggacagcggcgag
cgacgttcccagacggtctccgcgacctacgcgcacgacaccgaccggctcgtcgacatc
accttcgccgacgggtccgtcctgacgagcaccgccggacaccgggtgtacgtcgagggg
cgcgactggacgctcgtctccgagctgagcacgggcgacgccctgcgcgcgcccgacggc
tccctgctcgccgtcaccgggctccgggaccgcgcgggcctcgctccgcgcgaggtccac
gacctgacggtcgagggcctgcacacgttctacgtgcgtgccgaggggcagcgggcgaag
gacctcctggtccacaactgcgcgaagctcaccgacgagctcgagttccccaggagtggg
gcgcacacgctcagccgccacgtcgacccgacgcccgcagaggccaaggccttcgcgatc
gagaacgggaggaagggcctggcgccggtcagcagcgtctggaccaatcaggacgtcgcg
caggacgcggtcaacgccgtcatccagtactacttcttcccgcaagggaacaggcgggaa
gccagcttcacggccttcgacaacttcctccacaagcggggtcagtggcggaacaaggac
gagttccccatcttcggcacgtacgacggacactccccgctcgggaagatctacgacgac
cagggcaattggaccgaggccagcaaccgggtcaaggtggtgctgaagaggcttccgcga
caggacggccacgacggattcatcgtcttcacggcgcatccgctctga
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