Streptomyces gardneri: H4W23_10430
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Entry
H4W23_10430 CDS
T07252
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03030
DNA replication
sgx03430
Mismatch repair
sgx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4W23_10430 (dnaE)
03430 Mismatch repair
H4W23_10430 (dnaE)
03440 Homologous recombination
H4W23_10430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgx03032
]
H4W23_10430 (dnaE)
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_10430 (dnaE)
Enzymes [BR:
sgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4W23_10430 (dnaE)
DNA replication proteins [BR:
sgx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H4W23_10430 (dnaE)
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H4W23_10430 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPK44997
LinkDB
All DBs
Position
complement(2307234..2310773)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFKL
SSDAYAEGWLQKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQD
IFGKERYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHESTAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQINTDGMFVEKN
LMPKFDIPEGYTDTTWFREETMRGMHRRFPGGIPEDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGSDKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRAMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLIKMDFLGLRNLTIMDDAVKMVKA
NKGVELDLLALPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEKPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVIFQEGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKSRKAKGKYSTFPDFLDKVEAVVCNKRTI
ESLIKAGAFDEMGHTRKGMVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGEETSDEPGFGL
DVEFSDIEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKTDAAISQLTGGEHSDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVILTIPTVKVTPPMVSRLGEILKHHKGNTEVRI
KLQGPRTTTVLRLDRHRVTADPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctccacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcgtgcaacgagatgggcatgacccatatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccacacggcgaagaaggcc
ggggtcaccccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggttccggtggt
tacacccacaagacgatctgggcggcgaacgccaccggactccacaacctcttcaagctc
tcctccgacgcgtacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctccaagtggtccgaggggctcatcgcctccaccggctgcccctccggagagctccag
acccgcctccgcctcggccagttcgacgaggccctcaaggccgcctccgagtaccaggac
atcttcggcaaggagcggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgcgtccgcgacggactcctggagatcggcaggaagctcggcattccgccgctcgtcacc
aacgactcgcactacacgtacgcgcacgagtcgaccgcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctcaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacaccctcctggtcgcggagcagatcaacaccgacggcatgttcgtcgagaagaac
ctcatgccgaagttcgacatcccggaggggtacaccgacaccacctggttccgcgaggag
accatgcggggtatgcaccgccgcttccccgggggtatccccgaggaccgcatgaagcag
gtcgagtacgagatggacacgatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggcgaagaagcagggcatcgccgtgggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggactgatcttcgagcgcttcctcaaccccgagcgcgtctcgatgcccgatgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtgatccggtacgtgacggagaagtacggctcg
gacaaggtcgccatgatcggcacctacggaaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtcctcggctacccctacgccatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcgcacccgcgc
tacagcgaggccggcgagatccgcgcgatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgcccgcggcgtcgagggcctggtccgccagatgggtgtgcacgccgccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacacggac
ggcgtcaccatcacgcagtgggactacccccagtgcgagtcgctcggcctgatcaagatg
gacttcctgggcctcaggaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcgtcgagctcgacctgctggccctcccgctggacgaccccaagacgtacgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcgggcccatgcggtcg
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtgtccgccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcaccccgatccaccccgagctggagaagccgctcgaagaggtgctcgcggtc
acgtacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtcatgggcaagaagaagcccgaggag
ctggcgaagaacttcgtcatcttccaggagggcgcgaagaagaacggctacagcgacgag
gccatccaggcgctctgggacgttctggtccccttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtctcctactggaccgcctacctcaaggcgaactacccc
gccgagtacatggccggtctgctcacctcggtcaaggacgacaaggacaagtccgccgtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtgaacgagtcc
gagtcgaacttcgccgcccagggcgacgacgtgatcctcttcggtctctccgccgtgcgg
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtcgcgcaaggcgaaggggaagtac
agcaccttcccggacttcctcgacaaggtcgaggccgtcgtctgcaacaagcggaccatc
gagtcgctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggcatggtc
gcccaccacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgaggga
cagttcgacctcttcggcggcatgggcgaggagacgagcgacgagcccggcttcggcctg
gacgtcgagttctccgacatcgagtgggagaagtcttacctgctcgcccaggagcgcgag
atgctcggtctctacgtctccgaccacccgctcttcggcatcgagcacgtcctgtccgac
aagacggacgcggcgatctcgcagctcaccggcggcgagcacagcgacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctggccggctccatcgagtgcatgttcttcccggccacc
taccagctggtctccacccagctcgtcgaggacacggtcgtcttcgtcaagggacggctc
gacaagcgcgaggacgtgccccggctcgtcgccatggagctgatggtccccgacctgtcg
aacgccggaaccaacgcgccggtgatcctcaccatcccgacggtgaaggtgaccccgccg
atggtcagcaggctcggcgagatcctcaagcaccacaagggcaacaccgaggtgcggatc
aagctccagggcccccggaccaccactgtgctccggctcgaccggcaccgggtgacggcc
gacccggccctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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