Streptomyces gardneri: H4W23_10980
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Entry
H4W23_10980 CDS
T07252
Name
(GenBank) DUF2156 domain-containing protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4W23_10980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgx01007
]
H4W23_10980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgx03016
]
H4W23_10980
Enzymes [BR:
sgx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
H4W23_10980
Amino acid related enzymes [BR:
sgx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H4W23_10980
Transfer RNA biogenesis [BR:
sgx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H4W23_10980
Prokaryotic type
Other AARSs
H4W23_10980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
DUF6057
Rnk_N
Rhomboid
DUF7027
Motif
Other DBs
NCBI-ProteinID:
QPK45103
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Position
2431835..2433598
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AA seq
587 aa
AA seq
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MGEVRLSAEATPRGSTVRSRRSAAFAVWYLRVVTFINFLSAVWVSFGQDLRRHNEDNYFT
PYMLTAGFASGVFTLFLAITMRRRKRAAWILNMVLAGLFLLLFAVVMVFPEIRQHAQNWI
SLALTAAFVLALLLGRKEFYAKGDRSNPWLAAIVAVGGLLVTSLLAAVLVTVTNTSTAHS
TFLERWRYGVMRLVTLASDDSRFAGITTPGWVDVTINVLSTLLLFAVLFAAFRARRATDP
LTEEDEERLRALLDKQGDRDSLGYFALRREKSVVWSPSEKAAITYRVVGGVSLASGDPIG
DPEAWPGAIEPWLAEAREHGWIPAVMGASEEAGVIYARHGLDALELGDEAIVETDEFTLD
GRAMRTVRQAFNRVKRAGYEVRIRRHEDIPAAEMDELLRKADDWRDGATERGFSMALGRL
GDPQDGRCVMLECTDGEGELRAVLSFVPWGPKGLSLDLMRRDRDSENGLMEFMVIELLQR
AKEIGITQVSLNFAMFRSVFERGSKLGAGPVLRMWRSLLSFFSRWWQIESLYRANAKYRP
IWEPRFMLFEKSADLLRIGLAAGRAEGFLEAPGLPKWLHRKHLESGR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtccgcttgtctgccgaagcaacaccccgaggctccaccgtccgttcgcgg
cggagtgccgcgttcgccgtctggtacctgcgcgtcgtcacgttcatcaacttcctgagc
gccgtctgggtctcgttcgggcaggacctgcgccggcacaacgaggacaactacttcacc
ccgtacatgctcaccgcgggcttcgcctcgggcgtcttcacgctcttcctggcgatcacc
atgcgccgccgcaagcgggccgcgtggatcctcaacatggtcctcgccgggctcttcctg
ctgctcttcgccgtcgtgatggtcttcccggagatccggcagcacgcccagaactggatc
tcgctcgcgctgacggccgccttcgtcctggcgctgctgctcggccgcaaggagttctac
gcgaagggcgaccgctccaacccgtggctcgccgcgatcgtggccgtcggcggactgctc
gtcacctcgctgctcgccgccgtcctggtcaccgtcaccaacacctccaccgcccactcc
accttcctggagcgctggcggtacggcgtgatgcggctggtgaccctggcctccgacgac
tcgcgcttcgccgggatcaccacccccggctgggtcgacgtcaccatcaacgtcctctcc
acgctgctgctcttcgcggtgctcttcgccgccttccgcgcccgccgggccaccgacccg
ctgaccgaggaggacgaggagcggctgcgggccctgctcgacaagcagggggaccgcgac
tccctcggctacttcgcgctgcgccgcgagaagagtgtcgtctggtcgccgagcgagaag
gccgccatcacctaccgggtggtcggcggggtctcgctcgcctccggagacccgatcggc
gaccccgaggcctggcccggcgcgatcgagccctggctggccgaggcgcgcgagcacggc
tggatcccggccgtcatgggcgcgagcgaggaggccggggtcatctacgcccggcacggt
ctggacgccctggagctgggcgacgaggcgatcgtggagaccgacgagttcaccctggac
gggcgggccatgcggacggtccggcaggccttcaaccgggtcaagcgggccggttacgag
gtccgcatccggcgccacgaggacatcccggccgcggagatggacgagctgctccgcaag
gccgacgactggcgggacggggccaccgagcgcggcttctcgatggcgctcgggcggctc
ggggacccgcaggacgggcgctgcgtgatgctggagtgcactgatggcgagggtgagctg
cgggcggtgctctccttcgtgccctgggggccgaagggtctctcactcgacctgatgcgc
cgtgaccgggactccgagaacggcctgatggagttcatggtgatcgagctgctccagcgc
gcgaaggagatcgggatcacccaggtctcgctgaacttcgcgatgttccgctccgtcttc
gaacgcggctcgaagctcggggcgggacccgtgctgcgcatgtggcgttcactgctcagc
ttcttctcccgctggtggcagatcgagtcgctgtaccgcgccaacgccaagtaccgaccg
atctgggagccccgattcatgctcttcgagaagagcgccgacctgttgcgcatcggcctc
gccgccggccgggccgagggcttcctcgaagcccccggcctgccgaagtggctgcaccgc
aagcacctggagagcgggcgttga
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