Streptomyces gardneri: H4W23_11270
Help
Entry
H4W23_11270 CDS
T07252
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgx03000
]
H4W23_11270
Transcription factors [BR:
sgx03000
]
Prokaryotic type
Helix-turn-helix
LacI family
H4W23_11270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_IclR
HTH_3
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QPK45159
LinkDB
All DBs
Position
2503284..2504306
Genome browser
AA seq
340 aa
AA seq
DB search
MTARLADIATQAGVSEATVSRVLNGKPGVATATRESVLAALDVLGYERPVRLRQRSAGLV
GLITPELDNPIFPALAQVIGQALTRQGYTPVLATQTPGGSTEDELTDMLVERGVAGIIFV
SGLHADTTADMTRYDQLRGKGVPYVLLNGFSPKVQAPFVSPDDRAAMRLAVTHLAALGHT
RIGLAVGPKRFVPVLRKIEGFQKGMEERLGLGPEESEALIQHSLYTLEGGQAAAGALISR
GCTAVVCASDMMALGAIRAARQQGLDVPRDVSVVGFDDSPLIAFTDPPLTTIRQPVQAMG
QAAVRALLEEVGGTPAPHSEFVFMPELVVRGSTASAPSPS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcggcttgccgacatcgcaacccaggcgggggtcagtgaagccacagtcagc
cgcgtgctcaacggcaagcccggtgtggccaccgccacccgtgaatccgtgcttgccgcg
ctcgacgtcctcggctacgagcggcccgtacgactgcgtcagcgcagcgccgggctcgtc
ggcctcatcacccccgagctggacaacccgatcttccccgcgctcgcgcaggtcatcggg
caggccctgacccggcaggggtacacgccggtcctcgccacccagacccccggcgggtcc
accgaggacgagctcaccgacatgctggtggagcgcggtgtcgccggcatcatcttcgtc
tccggactgcacgccgacaccaccgccgacatgacgcgctacgaccagctgcgcggcaag
ggcgtcccgtacgtcctcctcaacggcttctcccccaaggtccaggcgcccttcgtgtcg
cccgacgaccgggcggcgatgcggctcgcggtgacgcacctggccgcgctcggccacacc
cggatcgggctcgccgtgggtcccaagcggttcgtgccggtgctgcgcaagatcgagggc
ttccagaagggcatggaggagcggctcggcctcggccccgaggagtccgaggcgctgatc
cagcactccctctacaccctggagggcgggcaggcggcggccggcgcgctgatctcccgc
ggctgcacggcggtcgtgtgcgcgagcgacatgatggcgctcggcgcgatccgggcggcc
cggcagcagggactggacgtgccccgggacgtctccgtcgtcggtttcgacgactcccct
ctcatagcgttcacggatccgccgctgaccaccatccgccagcccgtgcaggcgatggga
caggccgcggtccgcgcgctgctcgaagaggtcgggggcaccccggcaccgcactccgag
ttcgtcttcatgcctgaactggtcgttcgcggttcgaccgcctcggccccgtccccctcc
tga
DBGET
integrated database retrieval system
