Streptomyces gardneri: H4W23_12470
Help
Entry
H4W23_12470 CDS
T07252
Name
(GenBank) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00040
Pentose and glucuronate interconversions
sgx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H4W23_12470
Enzymes [BR:
sgx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H4W23_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
QPK45370
LinkDB
All DBs
Position
complement(2764180..2764995)
Genome browser
AA seq
271 aa
AA seq
DB search
MTSHKRKTGRRRAVVGGLSALGITGAAIVTSTLLAPAGAATLPAWPQAKGSTPVATTIEV
SGTYDGKLKRFAGTGELGSDGQSESQQPLFVLKDGATLKNVVIGTPAADGVHCLGSCTLQ
NVWWENVGEDAATFKGTSKTAVYAVQGGGAKGASDKVFQFNGAGKLVVNKFQVADFGKLV
RSCGNCKKQYPRTILINDVDITTPGKSIVGVNANYGDTASLRNIRIHGDTKKKIKPCTRF
TGNNTGKEPKEIGTGPDGTTCRYAAGDLSYD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacacaagcggaagaccggccgccgccgcgcggtcgtcggcggcctgagcgcc
ctcggcatcaccggcgcggcgatcgtcaccagtacgctcctcgcccccgcgggcgcggcg
acgctgcccgcctggccccaggccaagggcagtacgccggtcgccacgaccatcgaggtc
tcgggcacctacgacggcaagctcaagcgcttcgccggcacaggggagctcggctccgac
gggcagagcgagagccagcagcccctcttcgtcctcaaggacggcgcgaccctcaagaac
gtggtcatcggcacccccgccgccgacggggtccactgcctcggcagctgcaccctccag
aacgtctggtgggagaacgtcggcgaggacgccgccaccttcaagggcacctcgaagacc
gcggtgtacgcggtccagggcggcggcgcgaagggtgcgtccgacaaggtcttccagttc
aacggcgccggcaagctggtcgtgaacaagttccaggtcgccgacttcggcaagctggtc
cgctcctgcggcaactgcaagaagcagtacccgcgcacgatcctgatcaacgacgtcgac
atcaccacgcccggcaagtcgatcgtcggcgtcaacgccaactacggcgacaccgcgagc
ctgcgcaacatccggatccacggcgacaccaagaagaagatcaagccgtgcacccgcttc
accggcaacaacaccggcaaggagccgaaggagatcggcacgggcccggacggcaccacc
tgccgctacgcggccggagacctctcgtacgactag
DBGET
integrated database retrieval system
