Streptomyces gardneri: H4W23_15245
Help
Entry
H4W23_15245 CDS
T07252
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_15245
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
H4W23_15245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
QPK50519
LinkDB
All DBs
Position
3397832..3398272
Genome browser
AA seq
146 aa
AA seq
DB search
MSRQGSRDTAQELAVRRLLHASGLRYRVNTPVPGMPRRTIDIVFGPARIAVFLDGCFWHG
CPEHATQPKSNAEWWRAKLDKNMARDRETTTHLESMGWTVLRFWEHSSTEEISATVRAAV
DREKEHRARLRRRAPAPDARSRKGTG
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcagggctcccgtgacaccgctcaggaattggcggtgcgccggctcctgcac
gcctccggcctgcgctaccgagtcaacaccccggtcccggggatgccccgtcgcacgatc
gacatcgtcttcggccccgccaggatcgcggtcttcctggacggctgcttctggcacggc
tgcccggaacacgcgacacagccgaagtccaacgccgagtggtggcgcgcgaagctcgac
aagaacatggcacgggatcgcgagacgacgacgcacctcgaatcaatggggtggacggtg
ctgcggttctgggagcactcgtctacggaggagatctccgcgacggtgcgtgcggcagtg
gaccgggagaaggagcatcgggcccggctgaggcgtcgggccccggcgcccgacgcccga
agccgaaagggcaccggatga
DBGET
integrated database retrieval system
