Streptomyces gardneri: H4W23_16955
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Entry
H4W23_16955 CDS
T07252
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4W23_16955 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_16955 (xth)
Enzymes [BR:
sgx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H4W23_16955 (xth)
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H4W23_16955 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QPK46154
LinkDB
All DBs
Position
complement(3792487..3793290)
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AA seq
267 aa
AA seq
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MLTVTSVNVNGLRAAAKKGFVEWLAGTSADAVCLQEVRAEEAQLPAEVRAPEGWFTAHAP
AAAKGRAGVSLYTRREPDAVRVGFGVSEFDDSGRYIEADLPGVTVASLYLPSGEVGTERQ
DEKYRFMDAFLPYLKELKERAAADGREVVVCGDWNIAHREADLKNWKANKKNAGFLPEER
EWLGRVLDEGDGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQVATPGLAAKA
VKAYVERAATHAERWSDHAPVTAVYEL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgtcacgtccgtcaatgtcaatggtctccgcgccgccgccaagaagggcttc
gtcgagtggctggccggcacctccgccgacgccgtctgccttcaggaggtgcgtgccgag
gaggcgcagctgcccgccgaggtccgggcgcccgagggctggttcaccgcccacgcgccc
gccgccgccaagggccgcgccggagtctccctctacacccgccgcgagcccgacgcggtg
cgcgtcggcttcggggtgagcgagttcgacgacagcgggcggtacatcgaggccgacctg
cccggcgtgaccgtcgccagcctctacctgccctccggcgaggtcggcaccgagcgccag
gacgagaagtaccggttcatggacgcgttcctgccgtacctcaaggagctcaaggagcgg
gccgccgccgacgggcgcgaggtcgtcgtctgcggcgactggaacatcgcccaccgcgag
gccgacctcaagaactggaaggccaacaagaagaacgccggcttcctgcccgaggagcgg
gagtggctcggacgggtcctcgacgagggcgacggcgggtacgtcgacgtcgtccgcgcg
ctgcaccccgacgtcgaggggccctactcctggtggtcctaccgcggccgcgccttcgac
aacgacagcggctggcgcatcgactaccaggtcgccacccccggcctcgccgccaaggcc
gtcaaggcctatgtcgagcgggccgccacgcatgccgaacggtggagcgaccacgcaccc
gtgaccgccgtctacgagctgtag
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