Streptomyces gardneri: H4W23_18270
Help
Entry
H4W23_18270 CDS
T07252
Name
(GenBank) DUF2156 domain-containing protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4W23_18270
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgx01007
]
H4W23_18270
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgx03016
]
H4W23_18270
Enzymes [BR:
sgx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
H4W23_18270
Amino acid related enzymes [BR:
sgx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H4W23_18270
Transfer RNA biogenesis [BR:
sgx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H4W23_18270
Prokaryotic type
Other AARSs
H4W23_18270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
TgpA_N
DUF6410
DUF7985
Motif
Other DBs
NCBI-ProteinID:
QPK46382
LinkDB
All DBs
Position
4065434..4067305
Genome browser
AA seq
623 aa
AA seq
DB search
MSVTVDGDKSRLVPVQVRRILRGPRPEKVPALVGTACTLIGLIDIAAGVFPRFRASRMHA
VAEVLPGTLGPLSAALSLSAGVLLLLLAHGLKRHKRRAWRAAVVLLPVGAAAQFVWRHSV
LGALFSLALLALLLRHRHEFAALPDPRSRWRALANFVVMGAGSIALGLVIVSAHPRRVVG
DPSLTDRLEHVLYGLLGVEGPVAYTRGVDWTVGYSLGALGMLTALTTIYLAFRPEHPAAR
LTDDDETRLRALLDQHGGRDSLGHFALRDDKGVVFSPSGKAAVCYRVVSGVMLASGDPIG
DVEAWPGAIERFMDEAKAHSWTPAVMGCSETGGQVWTRETGLDALELGDEAIVDVADFSL
SGRAMRNVRQMVKRIERNGYTTQVRRVRDLDDEELDRVRRAAADWRGTDTERGFSMALGR
IGAPGDGDAVIATAHKDDPDDPAHPASPYGDLKAIIHFVPWGPDGMSLELMRRDRSADPG
MNELLIVAALQASPALGIERVSLNFAMFRSALARGEKIGAGPVLRVWRGLLVFLSRWFQI
ESLYKFNAKFRPRWEPRFVVYRNSRDLPRISLAAMRAEGFVTVSLPRPFPRRRPVPAPRP
CAHIVPALPATSSTATKHEVHAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcacggtagatggggacaaatcgcgattggttccggttcaggtacgccggatt
ctgcgcggcccccgccccgagaaggtccccgccctcgtcggcacggcctgcacgctcatc
ggcctgatcgacatcgccgccggagtcttcccccgcttccgcgccagccgcatgcacgcg
gtcgccgaagtcctccccggcaccctcggccccctctccgccgccctctccctcagcgcc
ggcgtcctcctcctgctcctcgcccacggcctcaagcggcacaagcgccgggcctggcgc
gccgccgtcgtcctcctccccgtcggcgccgccgcccagttcgtctggcgccactccgtc
ctcggcgccctcttctccctcgcactcctcgccctcctgctgcgccaccgccacgagttc
gccgccctccccgacccgcgcagccgctggcgggcactcgccaacttcgtcgtcatgggc
gccggatccatcgccctcggcctggtcatcgtcagcgcccacccgcgccgcgtcgtcggc
gaccccagcctcaccgaccgcctcgaacacgtcctctacgggctcctcggcgtcgaaggc
cccgtcgcctacacccgcggcgtcgactggaccgtcggctactccctcggcgccctcggc
atgctcaccgccctcaccaccatctacctcgccttccgccccgagcacccggccgcccgc
ctcaccgacgacgacgagacccggctgcgcgccctcctcgaccagcacggcggccgcgac
tccctcggccacttcgccctccgcgacgacaagggcgtcgtcttctcccccagcggcaag
gccgccgtctgctaccgcgtcgtctccggcgtgatgctcgccagcggcgaccccatcggc
gacgtcgaggcctggcccggcgccatcgaacgcttcatggacgaggccaaggcccactcc
tggacccccgccgtcatgggctgctccgagaccggcggccaggtctggacccgcgagacc
ggcctcgacgccctcgaactcggcgacgaggcgatcgtcgacgtcgccgacttctccctc
tcgggccgcgccatgcgcaacgtccgccagatggtcaagcgcatcgagcgcaacggctac
accacccaggtccgccgggtccgcgacctcgacgacgaggagctggatcgagtccgccgc
gccgccgccgactggcgcggcaccgacaccgagcgcggcttctccatggccctcggccgc
atcggcgcccccggcgacggggacgccgtcatagcgaccgcccacaaggacgatcccgac
gacccggcccaccccgcctccccctacggggacctgaaggcgatcatccacttcgtgccc
tggggcccggacggcatgtcgctcgaactcatgcgccgcgaccgctccgccgaccccggc
atgaacgaacttctcatcgtcgccgccctccaggcctccccggccctcggcatcgagcgc
gtctccctcaacttcgcgatgttccgctccgccctcgcgcgcggcgagaagatcggcgcg
ggacccgtcctccgtgtctggcgcggactgctcgtcttcctctcccgctggttccagatc
gagtcgctctacaagttcaacgccaagttccggccccgctgggaaccccgcttcgtcgtc
taccgcaacagccgcgacctgccccgcatcagcctcgccgccatgcgcgcagaaggattc
gtcaccgtctccctcccgcgccccttcccccgccgccgccccgtccccgccccgaggccc
tgcgcccacatcgtgcccgcgctccccgccacctcctcgacggccaccaagcacgaggtc
cacgcggcctga
DBGET
integrated database retrieval system
