Streptomyces gardneri: H4W23_20985
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Entry
H4W23_20985 CDS
T07252
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgx03021
]
H4W23_20985
Transcription machinery [BR:
sgx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H4W23_20985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QPK46855
LinkDB
All DBs
Position
complement(4650795..4651748)
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AA seq
317 aa
AA seq
DB search
MSTELGSSKVLTLTPVPVPTQTTAPTAAESSAVSTADSAAGSIVDSVATTAPPLPATSGA
LDTRTLSRSLFLRLRALDNEGAASDSPERTYVRDTLIELNLPLVRYAAARFRSRNEPMED
IVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLAL
TKASDELAQKLDRSPTVPELAAVLGVSEEDVVDGLAVGNAYTASSLDSPSPEDDGGEGSL
ADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVS
RLLTRTLAQLREGLISD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagaactgggcagctcgaaggtgctcacgctcacgcccgttcccgtgcccacg
cagacgacggctccgaccgcggccgaaagctccgcggtgagcaccgcggacagcgccgcg
gggagcatcgtcgacagcgtggcgaccacggctccgccgctgcccgccacgtccggcgcc
ctcgacacccgcaccctctcgcgctccctgttcctgcggctgcgcgccctcgacaacgaa
ggcgccgcctccgacagcccggagcggacctacgtccgcgacaccctcatcgagctcaac
ctccccctcgtgcggtacgcggcggcccgcttccgctcccgcaacgagccgatggaggac
atcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacgg
ggcgtggagttcccgacgttcgccatgccgacggtcgtcggcgagatcaagcgcttcttc
cgcgacacctcgtggtcggtgcgcgtgccgcgccggctccaggagctgcggctcgccctc
accaaggccagcgacgagctcgctcagaagctcgaccgctcccccaccgtgcccgaactc
gccgcggtgctcggggtgtcggaggaggacgtcgtcgacggcctcgccgtcggcaacgcc
tacacggcctcgtccctcgactccccctcgcccgaggacgacggcggcgagggctcgctg
gccgaccgcctgggctacgaggacaccgccctcgaaggcgtcgagtaccgcgagtcgctc
aagccgctgctcgccaaactgccgcccagggagcggcagatcatcatgctgcgcttcttc
gccaacatgacccagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcg
cgactgctcacccgcaccctcgcccagctgcgcgagggcctcatctccgactga
DBGET
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