Streptomyces gardneri: H4W23_21210
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Entry
H4W23_21210 CDS
T07252
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
sgx
Streptomyces gardneri
Pathway
sgx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H4W23_21210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sgx02022
]
H4W23_21210
Two-component system [BR:
sgx02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
H4W23_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_Tnp_ISL3
HTH_29
Sigma70_r4
HTH_7
HTH_IclR
HTH_40
Phage_NinH
HTH_28
HTH_24
HTH_Tnp_1
HTH_68
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QPK46892
LinkDB
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Position
complement(4690192..4690818)
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AA seq
208 aa
AA seq
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MTVPAPAPLRVLLADDEHLIRGALAALLGLEDDLVVVAEAATGPEALAMARAHRPDVAVL
DLQMPGADGVTVATVLRDELPGCRTMIVTGHGRPGHLKRALSAGVRGFVPKTVSAQRLAE
IIRTVHAGNRYVDPELASDAIAAGDSPLTAREAEVLELSADGAPVTEIARRASLSPGTVR
NYLSSAAAKLGAENRHTAVRLAQAKGWV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccctgcccccgctcctctgcgtgtactgctcgccgacgacgagcatctgatc
cgcggcgcgctcgccgcgctgctcggcctggaggacgacctcgtcgtcgtcgccgaggcc
gcgaccggccccgaggcgctcgccatggcccgcgcccaccgacccgacgtcgccgtgctc
gatctgcagatgccgggcgcggacggtgtgacggtcgccacggtcctgcgggacgaactg
cccggctgccgcaccatgatcgtgaccggtcacggccgtcccgggcacctcaagcgggcc
ctctccgccggcgtccggggcttcgtcccgaagaccgtcagcgcccagcggctcgccgag
atcatccgtaccgtgcacgccggaaaccgttacgtggacccggagttggcgtccgacgcc
atcgccgccggggactccccgctgaccgcccgggaggccgaggtcctcgaactctccgcc
gacggagcacccgtcacggagatcgcccggcgcgcctcgctctcccccgggaccgtccgg
aactacctctcctcggccgccgcgaagctcggtgccgagaaccgtcacacggcggtgcgt
ctcgcccaggcgaaaggttgggtatag
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