Streptomyces gardneri: H4W23_22730
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Entry
H4W23_22730 CDS
T07252
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00450
Selenocompound metabolism
sgx00970
Aminoacyl-tRNA biosynthesis
sgx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
H4W23_22730
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4W23_22730
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgx01007
]
H4W23_22730
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgx03016
]
H4W23_22730
Enzymes [BR:
sgx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
H4W23_22730
Amino acid related enzymes [BR:
sgx01007
]
Aminoacyl-tRNA synthetase
Class I (U)
H4W23_22730
Transfer RNA biogenesis [BR:
sgx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H4W23_22730
Prokaryotic type
Other AARSs
H4W23_22730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
QPK47157
LinkDB
All DBs
Position
4999397..5000962
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AA seq
521 aa
AA seq
DB search
MSTPVWITATPPATHGELHIGHLAGPYVAADVLTRYLRAEGEAVRFTTGTADHASSVEVR
ALRHNRKPEEVAEGYRAAITADWLRSGVEFDHIVRPRRDKGYGRWVQDLFSRLFAQGVIA
PRTRLLPYCEPCDRWLYGAHATGSCPHCGADSDGGMCHECARPNDGGDLISARCAVCDTP
AVARRCPRLYVPLEPFRETLAEYWATAGLPPRLAALCESLVEDGLPDIAVGHPAEWGLPV
PVDGFPEHRIDGCFEAAAMHLFGYDTKGPLPRRAIHFCGFGHSFCHAVLLPVLLLAQDVK
LPQDFNVNESYVIEEGVQEGNVWALDLLTEYGSDTLRRHVLQARPLGRRTVFHRERLAAA
RRELDESWNSWLARLFASVREECGGRAPQALPGGTGWEILERRLHRGVDDLREAYGPDAF
DPRRAVAVLDEMVRSVADFGHVNAHERCRPSTSCRHLPALAAQLAVASALSAWARPVMPE
GADRLAAALQVEAGRPVDWHALTGPLPGTRLAPPSGPVFGF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccccgtctggatcaccgcgacccctcccgccacccacggcgaactccacatc
ggtcacctcgccgggccgtacgtcgccgccgacgtcctcacccgctatctgcgggccgag
ggggaggcggtccggttcaccaccggcaccgccgaccacgccagctccgtcgaggtccgc
gcgctgcgccacaaccgcaagcccgaggaggtcgcggagggttaccgcgccgcgatcacc
gccgactggctgcgctcgggcgtcgagttcgaccacatcgtgcgcccccggcgcgacaag
ggctacggacgctgggtgcaggacctcttcagcagactcttcgcccaaggggtcatcgcc
ccgcgcacccgtctgctgccctactgcgagccctgcgaccgctggctgtacggggcgcac
gccaccggcagctgcccgcactgcggcgcggacagcgacggcggcatgtgccacgagtgc
gcccgccccaacgacggcggcgacctcatctcggcgcgctgcgcggtctgcgacaccccg
gcggtcgcgcgccgctgcccccggctgtacgtgcccctggagcccttccgggagacgctc
gccgagtactgggcgacggccgggctcccgccccggctcgccgccctgtgcgagtcgctc
gtcgaggacgggctgccggacatcgccgtcggccaccccgcggagtggggcctgccggtg
ccggtcgacggcttccccgagcaccggatcgacggctgcttcgaggccgccgcgatgcac
ctcttcggctacgacaccaagggcccgctgccccgtcgcgccatccacttctgcggcttc
gggcactccttctgccacgcggtgctcctgccggtgctgctgctcgcgcaggacgtcaag
ctgccgcaggacttcaacgtcaacgagtcgtacgtcatcgaggaaggcgtccaggagggc
aacgtctgggcgctcgacctcctcaccgagtacggctccgacaccctgcgccggcacgtc
ctccaggcccgcccgctgggccgccggaccgtcttccaccgggagcggctcgcggccgcc
cgccgggagctggacgagagctggaacagctggctcgcgcggctcttcgcctccgtacgg
gaggagtgcggcggtcgcgcgccgcaggcgctgcccggcggcacgggctgggagatcctg
gaacggcggctccaccggggcgtggacgatctgcgcgaggcgtacggcccggacgccttc
gacccgcgccgggcggtcgccgtcctcgacgagatggtccgctcggtggccgacttcggc
catgtcaacgcccacgagcggtgccggcccagcacctcctgccgtcatctcccggcgctg
gcagcacagttggcggtggcgtcggcgctctccgcgtgggcgcggccggtgatgccggag
ggtgcggaccggctcgcggcggcgcttcaggtggaggcgggccggccggtcgactggcac
gcgctgacgggccccctcccggggacccggctggcgccgccgtccggcccggtcttcgga
ttctga
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