Streptomyces gardneri: H4W23_24685
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Entry
H4W23_24685 CDS
T07252
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03420
Nucleotide excision repair
sgx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4W23_24685 (pcrA)
03430 Mismatch repair
H4W23_24685 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_24685 (pcrA)
Enzymes [BR:
sgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W23_24685 (pcrA)
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4W23_24685 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H4W23_24685 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QPK47512
LinkDB
All DBs
Position
5402295..5404742
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AA seq
815 aa
AA seq
DB search
MSSLFDDSFLAGLQNHSSGEAPPPPEDHEHGAPAPEEVPHDLFGEHFDAPPPRDAYYRDG
AARPVVDPAALLEGLNEQQRAAVVHTDTPLLIVAGAGSGKTRVLTHRIAHLLGTRHVHPG
QILAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKRLGFTSSFSIYD
AADSKRLMSLVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEAFADQAADGFEKTLAEAY
RMYQARLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVR
ELVGTGYEDLGPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQNYRSTQT
ILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDRLTDTGEAKA
GDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDNVPL
RRILNVPKRGIGERAEAMIDALSLREKITFPQALKRVDEAYGMAARSANAVKRFNALMDE
LRTVVESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQERGEE
PATLAEFLEKVALVADSDQIPDEDEEGRGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHM
RALGQAKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPASRFLEEIPPAYLEW
KRTGPMAKPAGPTSGITSSLSSSRARSGPSGFATRRAGEKPVITLTIGDRVTHDQFGLGT
VTAVTGVGADAQATIDFGDEKPKRLLLRYAPVEKL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggccggcctccagaaccactcctcgggggag
gccccgcccccgcccgaggaccacgagcacggcgccccggccccggaggaggtcccgcac
gacctcttcggggagcacttcgacgcgcccccgccccgggacgcgtactaccgcgacggc
gccgcgcgcccggtcgtcgaccccgccgcgttgctggaagggctgaacgagcagcagcgc
gccgccgtcgtccacaccgacaccccgctgctcatcgtcgccggcgccggctccggcaag
acccgggtgctgacccaccgcatcgcccacctcctgggcacgcggcacgtccaccccggc
cagatactggcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgag
cagctcgtcggcccgcgcgccaacgccatgtgggtcatgaccttccacagcgcgtgcgtg
cgcatcctgcgccgcgagtcgaagcggctcggcttcacctcctccttctcgatctacgac
gccgccgactccaagcggctgatgtccctggtctgccgtgacctggacctcgatccgaag
aagttcccgccgaagtcgttcagcgccaagatctcgaacctcaagaacgagctgatcgac
gaggaggccttcgccgaccaggcggccgacggcttcgagaagacgctcgccgaggcctac
cggatgtaccaggcgcggctgcgcgaggccaacgccctggacttcgacgacatcatcatg
acgacggtccacctgctccaggccttccccgacgtcgccgagcactaccgccgccgcttc
cgccacgtcctcgtcgacgagtaccaggacaccaaccacgcccagtacaccctcgtgcgg
gagctcgtcggcaccggctacgaggacctcggcccggccgagctgtgcgtcgtcggcgac
gccgaccagtcgatctacgccttccgcggcgcgaccatccgcaacatcctccagttcgag
gaggactacccggacgcgacgacgatcctcctggagcagaactaccgctccacgcagacg
atcctctccgccgcgaacgccgtcatcgagcgcaacgagtcccgccgccccaagaacctc
tggaccaacgcgggcgcgggcgcgcagatcaccggctacgtcgccgacaccgagcacgac
gaggcgcagttcgtcgccgacgagatcgaccggctcacggacaccggcgaggccaaggcg
ggcgacgtcgccgtcttctaccggaccaacgcccagtcccgtgtcttcgaagagatcttc
atccgtgtcggactgccgtacaaggtcgtcggcggcgtgcgcttctacgagcgcaaggag
gtccgggacgtcctcgcgtacctccgcgtcctcgccaaccccgaggacaacgtcccgctg
cgccgcatcctcaacgtcccgaagcggggcatcggcgagcgcgccgaggcgatgatcgac
gccctctccctgcgcgagaagatcaccttcccgcaggccctcaagcgggtcgacgaggcg
tacggcatggccgcgcgctccgcgaacgccgtgaagcgcttcaacgcgctgatggacgag
ctgcgtacggtcgtcgagtccggcgccggccccgccgtcgtcctggaggccgtcctggag
cgcacgggctacctggccgagctccaggcctcgaccgacccgcaggacgagacccggatc
gagaacctccaggaactcgctgccgtcgccctcgagttcgagcaggagcgcggcgaggag
cccgcgaccctcgccgagttcctggagaaggtcgccctcgtcgccgactcggaccagatc
ccggacgaggacgaggaaggccggggcgtcatcacgctgatgaccctgcacaccgccaag
ggcctggagttcccggtcgtgttcctcaccggcatggaggacggcgtcttcccgcacatg
cgggccctcggccaggcgaaggagctggaggaggagcggcgcctcgcgtacgtcggcatc
acgcgcgcccgcgagcggctctacctcacgcgctcgtcgatgcgcagcgcctggggccag
ccctcgtacaacccggcctcgcgcttccttgaggagatcccgcccgcgtacctggagtgg
aagcggaccggtccgatggcgaagcccgccgggccgacctcgggcatcacctcctcactc
tcctcctcccgggcgcgttccggcccctcgggcttcgccacccggcgcgcgggcgagaag
ccggtcatcacgctcacgatcggcgaccgcgtcacgcacgaccagttcggtcttggcacg
gtcacggcggtgacgggggtcggcgcggacgcccaggcgaccatcgacttcggcgacgag
aagccgaagcgactgctcctgcggtacgcgccggtcgagaagctgtag
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