Streptomyces gardneri: H4W23_26670
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Entry
H4W23_26670 CDS
T07252
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03420
Nucleotide excision repair
sgx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4W23_26670
03430 Mismatch repair
H4W23_26670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_26670
Enzymes [BR:
sgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W23_26670
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4W23_26670
MMR (mismatch excision repair)
Other MMR factors
H4W23_26670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
QPK47866
LinkDB
All DBs
Position
5870203..5872380
Genome browser
AA seq
725 aa
AA seq
DB search
MTAATHSTLFPQVPETADAVLDGLDPEQREVALALSGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQFFWPKAVGGD
MPRLLERKIQLVADAAARCRVRLDRNELRDVTSEIEWAKVTQTVPADYPAAVAKSVRDAP
RDPAEISQIYALYEQLKRDRSVIDFEDVLLLTVGILQDRHDIAEQIRRQYQHFVVDEYQD
VSPLQQRLLDLWLGDRDNLCVVGDASQTIYSFTGATPDHLLNFRNRHPNATVVKLVRDYR
STPQVVHLANGLLSQARGRAAEHRLELISQRDPGPEPVYTEYADEPAEAEGTARRIRDLI
AAGVPAGEIAVLYRINAQSEVYEQALADAGVPYQLRGAERFFERQEVREAGIALRGAARA
GGNDSLLDDAEDLPAQVRAVLSTKGWTTKPPSGSGAVRDRWESLAALVRLAEDFARAKSG
ATLSDLVAELDERAAAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLTEGMMPITYAKTDE
QVEEERRLLYVGVTRARVHLSLSWALSRAPGGRASRRPSRFLKGLRPGSGSLGSVGVAGS
GGIERGIGGGRRKPRGPVLCRVCGATLTEAGAMKLMRCEDCPSDMDEGLYERLRDWRSEQ
ARELAQPAYCVFTDKTLMAIAERVPTTDGELSSIAGVGIRKLDRFGADVLAICAGGEGGA
GGDEV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccactctcttcccgcaggtcccggagacggccgacgcggtg
ctcgacgggctcgaccccgagcagcgcgaggtcgcgctggccctgagcggcccggtgtgc
gtgctggcgggagccggcacgggcaagacgcgcgccatcacccaccggatcgcctacggg
gtgcgggcgggcatactccagcccgccagtgtgctggccgtcaccttcaccaaccgcgcc
gcgggcgagatgcgcggccggctccggcagctcggagcgggcggggtccaggcccgtacg
ttccactccgccgccctccgccagctccagttcttctggccgaaggccgtcggcggcgac
atgccccggctcctggagcggaagatccagctcgtggccgacgccgcggcccgctgccgc
gtccgcctcgaccggaacgagctgcgcgacgtcacgagcgagatcgaatgggccaaggtc
acccagacggtccccgccgactatccggcggcggtcgccaagtccgtcagggacgccccg
cgcgacccggccgagatcagtcagatctacgccctgtacgagcagctcaagcgcgaccgc
tcggtgatcgacttcgaggacgtgctgctgctcaccgtcggcatcctccaggaccggcac
gacatcgccgagcagatccgccgccagtaccagcacttcgtcgtggacgagtaccaggac
gtctccccgctccagcagcgcctgctcgacctgtggctcggcgaccgggacaacctctgc
gtcgtcggcgacgccagccagaccatctactcgttcaccggcgccacccccgaccacctg
ctgaacttccgcaaccgtcacccgaacgccacggtggtcaagctcgtccgcgactaccgc
tccaccccgcaggtcgtccatctcgccaacggccttctcagccaggcccgcggccgggcc
gccgagcaccgcctggagctgatctcccagcgcgacccgggccccgagcccgtctacacg
gagtacgccgacgaaccggccgaggccgagggcaccgcccgccgcatccgggacctcatc
gccgccggcgtcccggccggcgagatcgccgtcctctaccggatcaacgcccagtccgag
gtttacgagcaggccctcgccgacgccggagtgccctaccagctccgcggcgccgagcgc
ttcttcgagcgccaggaggtacgggaagcgggcatcgccctgcgcggcgccgcccgcgcc
ggcggcaacgactcgctcctcgacgacgccgaggaccttcccgcacaggtcagggcggtc
ctgtcgaccaagggctggaccaccaagccgccctccggctccggcgccgtccgcgaccgc
tgggagtcgctcgccgcgctcgtccggctcgccgaggacttcgcccgcgccaagtcgggc
gccaccctctccgacctggtcgccgagctcgacgagcgggccgccgcccagcacgcgccg
accgtccagggcgtcaccctcgcctcgctgcacgcggccaagggcctcgaatgggacgcc
gtgttcctggtcggcctcaccgagggcatgatgcccatcacctacgccaagaccgacgag
caggtcgaggaggagcgccgcctgctgtacgtgggcgtcacccgggcccgcgtccacctc
tcgctctcctgggcgctgtcccgtgccccgggcggccgcgcctcccggcgccccagccgc
ttcctcaaggggctgcgccccggctccggctccctcggctccgtcggcgtcgccggctcc
ggaggcatcgagcggggcatcgggggcggccggcgcaagccgcgcggccccgtcctgtgc
cgggtctgcggggccacgctcaccgaggcgggcgcgatgaagctcatgcgctgcgaggac
tgcccctcggacatggacgaggggctgtacgagcggctccgcgactggcgctccgagcag
gcccgggagctggcccagcccgcctactgcgtcttcaccgacaagacgctcatggccatc
gccgagcgcgtcccgaccaccgacggcgagctctcctcgatcgccggcgtcggcatccgc
aagctcgaccgcttcggagccgacgtcctggccatctgcgcaggtggggagggaggggcg
gggggcgacgaagtctga
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