Streptomyces gardneri: H4W23_27355
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Entry
H4W23_27355 CDS
T07252
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00300
Lysine biosynthesis
sgx00470
D-Amino acid metabolism
sgx01100
Metabolic pathways
sgx01110
Biosynthesis of secondary metabolites
sgx01120
Microbial metabolism in diverse environments
sgx01230
Biosynthesis of amino acids
Module
sgx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4W23_27355 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H4W23_27355 (lysA)
Enzymes [BR:
sgx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H4W23_27355 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
QPK47984
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Position
6009815..6011206
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLTEGHYSAPPADLNVLDPKVWARTVTRDERGVATVGGLGVDALAE
EFGTPAYFLDETDFRARCRAWAEAFGKDADVFYAGKAFLSRAIVRWLKEEGLNLDVCSGG
ELTTALSAGMPAERIAFHGNNKSEEEIRTAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALS
EIVTRECESAGLRTPRISVEPGRAIVGPTAFTLYRVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVSLVSRTSEAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgcaggcccccgccacgcagacgtcctcaccgagggccac
tactccgcgccgcccgccgacctcaacgtcctcgaccccaaggtgtgggcccggaccgtc
acgagggacgagcgaggggtcgccaccgtcgggggactgggcgtcgacgcgctcgccgag
gagttcggcacccccgcctacttcctcgacgagaccgacttccgcgcccgctgccgcgcc
tgggccgaggccttcggcaaggacgccgacgtgttctacgccgggaaggcgttcctctcc
cgggccatcgtccggtggctcaaggaggaggggctgaatcttgatgtgtgctccgggggg
gagctcaccaccgccctctccgccggcatgcccgccgagcgcatcgccttccacggcaac
aacaagagcgaggaagagatccggacggccgtcgaggccggtgtcgggcggatcgtgctc
gactccttccaggagatcgtgcgggtcgcccacatcgcgcagtccctcgggaagcgccag
cgcgtgcagatccgggtgaccgtcggcgtcgaggcccacacccacgagttcatcgccacc
gcgcacgaggaccagaagttcggcatcgcgctcgccggcgggcaggccgccgaggccgtg
cgcagggcgctgaagctggacggcctggagctcatcggcatccactcgcacatcggctcg
cagatcttcgacatggccgggttcgaggtctccgcccggcgcgtcgtgcagctgctcgcc
gaggtgcgtgacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcgtacacttccgaggacgacccgcgcgagccgcacgagatcgccaaggcgctcagc
gagatcgtcacgcgggagtgcgagtccgcggggctgcggacgccgcggatctccgtcgag
ccggggcgggccatcgtgggccccaccgccttcacgctctaccgggtcggcaccgtcaag
cccctcgaagggctgcgcacgtacgtgagcgtcgacggcggcatgtcggacaacatccgc
acggccctgtacgacgccgagtacagcgtcagcctcgtctcgcggaccagcgaggccgag
ccgatgctctcccgggtcgtcggcaagcactgcgagagcggtgacatcgtcgtacgggac
gccttcctccccgccgacctggcccccggcgacctcatcgcagtacccgccaccggcgcg
tactgccgctccatggccagcaactacaaccacgctctccggccgcccgtcgtcgccgtg
cgtgacggcgaggcccgggtgatcgtccggcgcgagacggaggaagatcttctgcgcctc
gacgtcggctga
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