Streptomyces gardneri: H4W23_28460
Help
Entry
H4W23_28460 CDS
T07252
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgx03032
]
H4W23_28460
03036 Chromosome and associated proteins [BR:
sgx03036
]
H4W23_28460
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_28460
DNA replication proteins [BR:
sgx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H4W23_28460
Chromosome and associated proteins [BR:
sgx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H4W23_28460
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H4W23_28460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
QPK48184
LinkDB
All DBs
Position
6262271..6262972
Genome browser
AA seq
233 aa
AA seq
DB search
MNKAQLVEAIADKMGGRQQAAEAVDHVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVSVKKAPKGSLTGGASATVKK
AAAKKATTAKKAAAKKATPAKKATTAAAKKATPAKKATTAATKKTAAAKKASTAAKKTTT
AAAKKTTTAAAKKAVKATAKKTAPAAKKATATKAPAKKTTARKTTAKKAAAKK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggtcgccagcaggcc
gccgaagccgtcgaccacgtgctcgacgccatcgtgcgtgccgtggtcgcgggcgaccgt
gtctcggtcacgggcttcggctcgttcgagaaggtcgaccgtccggcccgctacgcccgc
aacccgcagacgggcgagcgcgtccgggtcaagaagacctcggtgccgcgcttccgtgcg
ggtcagggcttcaaggacctggtcagcggctcgaagaagctccccaagggtggcgaggtc
tccgtcaagaaggcccccaagggcagcctcaccggtggtgcctccgcgaccgtgaagaag
gccgcggccaagaaggccaccaccgccaagaaggccgccgcgaagaaggcgacccccgcg
aagaaggccacgacggccgccgcgaagaaggcgaccccggccaagaaggccaccaccgcc
gcgacgaagaagaccgccgcggcgaagaaggcctcgacggcggcgaagaagaccacgacc
gccgccgcgaagaagaccaccacggccgcggcgaagaaggccgtgaaggccacggccaag
aagaccgcgccggccgcgaagaaggccacggcgacgaaggcgcccgcgaagaagaccacg
gcgcgcaagacgaccgccaagaaggccgccgccaagaagtag
DBGET
integrated database retrieval system
