Streptomyces gardneri: H4W23_28635
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Entry
H4W23_28635 CDS
T07252
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx02024
Quorum sensing
sgx03060
Protein export
sgx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H4W23_28635 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H4W23_28635 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H4W23_28635 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sgx02044
]
H4W23_28635 (ffh)
Enzymes [BR:
sgx01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H4W23_28635 (ffh)
Secretion system [BR:
sgx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H4W23_28635 (ffh)
Eukaryotic Sec-SRP protein
H4W23_28635 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
nSTAND3
ArsA_ATPase
cobW
AAA_24
APS_kinase
AAA_22
AAA_31
MeaB
AAA_26
AAA_18
MMR_HSR1
AAA_33
NPHP3_N
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QPK48215
LinkDB
All DBs
Position
6299503..6301056
Genome browser
AA seq
517 aa
AA seq
DB search
MFDTLSDRLAATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRSFIKQVKERAL
GIEVSQALNPAQQVIKIVNEELIAILGGETRRLRFAKTAPTVIMLAGLQGAGKTTLAGKL
GVWLKSQGHSPLLVACDLQRPNAVNQLSVVADRAGVAFYGPQPGNGVGDPVQVAKDSIEY
ARTKMYDVVVVDTAGRLGIDQELMQQAADIRDAVSPDEVLFVVDAMIGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSIAHVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLSLIEKAQQTFDEDEAAKMASKLASKKGQDFTLDDFLAQMEQVRKMGSISKLLGMLPG
MGQMKEQIANIDERDVDRTAAIIKSMTPAERQDPTIINGSRRARIAKGSGVEVSAVKGLV
ERFFEARKMMSRMAQGGGMPGMPGMPGMGGGPGRQKKQVKQAKGKRKSGNPMKRKAEEQA
EAERREQAQAGGAFGLPAAGQSPKDFELPDEFKKFMG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgataccctctccgaccgccttgcagcgaccttcaagaacctccgcggcaagggc
cgtctgtccgaggcggacatcgacgccaccgcgcgcgagatccgtatcgcgctgctcgaa
gcggatgtcgccctgccggtcgtccggtccttcatcaagcaggtcaaggagcgcgccctc
gggatcgaggtctcgcaggccctgaacccggcccagcaggtcatcaagatcgtcaacgag
gagctcatcgccatcctcggcggcgagacccggcgcctgcggttcgcgaagaccgcgccg
acggtgatcatgctcgccggtctccagggtgccggtaagaccaccctcgccggaaagctc
ggcgtctggctcaagagccagggccactccccgctgctcgtcgcctgcgacctccagcgc
cccaacgccgtcaaccagctctccgtcgtcgccgaccgcgcgggcgtggccttctacggc
ccgcagccgggcaacggcgtcggtgacccggtccaggtcgcgaaggactcgatcgagtac
gcgcggaccaagatgtacgacgtggtcgtcgtcgacaccgccggccgcctcggcatcgac
caggagctgatgcagcaggccgcggacatccgcgacgccgtcagccccgacgaggtcctc
ttcgtcgtcgacgccatgatcggtcaggacgcggtcaacaccgccgaggccttccgtgac
ggcgtcggcttcgacggcgtcgtgctctccaagctcgacggcgacgcccgcggtggtgcc
gcgctctccatcgcgcacgtcaccggcaagcagatcatgttcgcctccaacggcgagaag
ctcgacgacttcgacgcgttccacccggaccgcatggcgtcgcgcatcctcggcatgggc
gacatgctctccctcatcgagaaggcccagcagaccttcgacgaggacgaggccgccaag
atggcctcgaagctcgcgtcgaagaagggtcaggacttcacgctcgacgacttcctggcc
cagatggagcaggtccgcaagatgggctccatctccaagctgctcggcatgctgcccggc
atgggtcagatgaaggagcagatcgccaacatcgacgagcgggacgtcgaccgcacggcc
gccatcatcaagtcgatgactccggccgagcgccaggacccgaccatcatcaacggctcc
cgccgcgcccgtatcgccaagggctcgggcgtcgaggtcagcgccgtgaagggcctggtc
gagcggttcttcgaggcccgcaagatgatgtcccgcatggcccagggcggcggcatgccg
gggatgcccggcatgcccggcatgggtggcggccccggccggcagaagaagcaggtcaag
caggccaagggcaagcgcaagagcggcaacccgatgaagcggaaggccgaggagcaggcc
gaggccgagcgccgcgagcaggcccaggcgggcggcgccttcggtctcccggccgcgggc
cagagcccgaaggacttcgagctcccggacgagttcaagaagttcatgggctga
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integrated database retrieval system
