Streptomyces gardneri: H4W23_29210
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Entry
H4W23_29210 CDS
T07252
Name
(GenBank) HAMP domain-containing protein
Organism
sgx
Streptomyces gardneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG14
RNase_Y_N
OmpH
Motif
Other DBs
NCBI-ProteinID:
QPK48318
LinkDB
All DBs
Position
6433509..6438995
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AA seq
1828 aa
AA seq
DB search
MESGTAARRGGGSGTRARGGRPRGGTVQVDEASLERLLAALVSMRDGNFRKRLTVSGDGV
MAEISAVFNEVADRQMHVTGELSRVRRVVGREGKLSERLEAGASEGAWAAAIEAANALVD
DLARPVSEVGRVLSAVAEGDLDQRMDLRSEGADGAVRPLRGEFLKVARTANNLVDQLSVF
ASEVTRVAVEVGTDGKLGGQAQVRGVSGSWKDLTDSVNTMANRLTAQVRDIALVTTAVAD
GDLSQKVTANVAGEMLELKNTVNRMVDQLSSFSSEVTRVAREVGTEGELGGQAEVAGVAG
VWKDLTDSVNTMAGNLTNQVRGIAEVTTAVANGDLSQKVRVSARGEIAQLADTINQMTET
LRTFADEVTRVSGEVGAQGLLGGQAQVPGAAGTWKDLTDSVNTVFRNITTQVRDIAQVTT
AVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGSEVTRVAREVGVEGLLGGQAEVP
GAAGTWKDLTDSVNTAFRNLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNT
MVSQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGRWRELTDSVNFMAGNLTSQVRQIA
QVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTDGRLGGQ
AQVPGVAGVWRDLTDSVNGMAGNLTTQVRNIAQVATAVARGDLSQKIDVDARGEILELKN
TLNTMVDQLSNFAEQVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNFMANNLTIQV
RNIAEVTTAVAMGDLSKKITVDARGEILELVTTVNTMVDQLSNFADEVTRVAREVGTEGI
LGGQARVRGVTGTWKDLSDNVNLMANNLTSQVRNISRVSAAVANGDLTKKVTVEARGEVA
ELAETVNTMVTTLSSFADEVTRVAREVGTEGELGGQARVPGVSGTWKDLTESVNSMADNL
TGQVRQIAAVTTAIAKGDLTKKIDIDARGEIQELKNTINTMVDQLSNFAEEVTRVAREVG
TDGQLGGQARVRDVEGTWSDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNVKIDGVDA
AGEIQALQDNINTMIANLRDTTLANDEQDWLKSNLARISGLMQGRRDLDDVASLIMSELT
PVVSAQHGAFFVAMPTGHAHSDAELVGEGDGSYELRMRGSYGYSTGSMPTSFRPGETLIG
TAAEEKRTIQVNVPPGYLKISSGLGEASPAHVIVLPVLFEGKVLGVIELASFQPFAQIQR
DFLNQIAELIATTVNTISVNTKTEVLLQQSQELTEQLKERSAELEHRQKELQGSNLELEE
KAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLI
LAKLLADNAETNLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQ
LVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVE
LVIRPANADVPQSIREQLLEAGSLRDPEADLIAFSVTDTGIGIAASKMRVIFEAFKQADG
TTSRKYGGTGLGLSISREIARLLGGEIFAASESGRGSTFTLYLPLSPTELPSHGYGQGAS
DAEDVQQGAEDGSAGAVHAFPHFPPAPVRTEARSGAGALFRHRRKAAAEATGARTAVPGQ
FGQQGAVDRAEPEAEVEPRRTFNFSGERVLIVDDDIRNVFALTSVLEQHGLAVLYAENGR
EGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAI
ESGASDYVTKPVDPDHLLSVMEQWMRGE
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcacggcggcgcggcgtggcggcgggagcggcacgcgcgcgaggggcggg
cgtcctcgtggggggacggtccaggtggacgaggcgtcgctggagcggttgctggccgcg
ctggtgtcgatgcgggacgggaacttccgcaagcggctcacggtgtccggtgacggggtc
atggcggagatctccgccgtgttcaacgaggtcgcggaccggcagatgcacgtgacgggg
gagctgtcgcgggtccgtcgggtggtcgggcgcgagggcaagctgtccgagcggctggag
gccggggcgagcgaaggggcgtgggccgcggcgatcgaggccgcgaacgcgctggtcgac
gatctggcccggcccgtgtccgaggtggggcgggtgctgtcggcggtggccgagggtgac
ctcgaccagcggatggacctgcgttcggagggtgccgacggggccgtacggccgctgcgt
ggggagttcctgaaggtcgcgcgtaccgccaacaacctcgtcgaccagctgtcggtcttc
gcgtccgaggtgacgagagttgccgtcgaggtgggtacggacggcaagctgggcgggcag
gcgcaggtgcgtggggtgtccggttcgtggaaggacctcacggactcggtcaacaccatg
gcgaaccggctgacggcccaggtgcgggacatcgcgctcgtgacgacggcggtggcggac
ggcgatctgtcgcagaaggtcacggcgaacgtcgccggcgagatgctggagctgaagaac
accgtcaaccggatggtggaccagctgtcgtcgttctcctccgaggtcacgcgtgtggcc
cgtgaggtgggtacggagggcgagctcggcggtcaggccgaggtggccggggtcgcgggt
gtgtggaaggacctcaccgattccgtcaacacgatggcggggaatctcaccaatcaggtg
agagggatcgccgaggtgacgacggcggtcgccaacggtgatctgtcgcagaaggtgcgg
gtctccgcgcgtggtgagatcgcgcagctcgcggacacgatcaaccagatgaccgagacg
ctgcggacgttcgccgacgaggtgacccgggtgtcgggcgaggtcggcgcgcagggtctg
ctcggtggtcaggcgcaggtgccgggcgccgcggggacgtggaaggacctgaccgactcg
gtcaacaccgtcttccggaacatcaccacgcaggtgcgggacatcgcgcaggtgacgacg
gccgtggccaacggtgacctgtcgcagaaggtcaccgtcgacgtcgccggcgagatgctg
gagctcaagaacaccgtcaacacgatggtcgaccagctgtcggcattcggttccgaggtg
acccgggtcgcccgggaggtcggcgtcgagggtctgctcggtggtcaggccgaggtgccg
ggtgcggccgggacgtggaaggacctgaccgactcggtcaacacggccttccggaacctg
accggtcaggtgcgggacatcgcgcaggtgacgacggccgtggccaacggcgacctgtcg
cagaaggtcaccgtcgacgtggccggcgagatgctggagctgaagaacaccgtcaacacg
atggtgtcgcagctctcgtccttcgccgaccaggtgacgcggatggcgcgggacgtgggt
accgagggccggctcggcgggcaggcgcgggtggacggcgtctccggccgctggcgtgag
ctcaccgactccgtgaacttcatggccggcaacctgacctcgcaggtgcggcagatcgcg
caggtgacgacggcggtggcccgcggtgacctgtcgcagaagatcgacgtggacgcccgg
ggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccagctctccgccttc
gcggatcaggtgacccgggtggcccgcgaggtgggtaccgacggccggctgggcggtcag
gcgcaggtgccgggtgtggccggcgtgtggcgcgatctgacggactcggtgaacggcatg
gccgggaacctgacgacccaggtccgtaacatcgcgcaggtcgccacggcggtggcccgc
ggtgacctgtcgcagaagatcgacgtggacgcccggggcgagatcctggagctgaagaac
accctcaacacgatggtggaccagctgtcgaacttcgccgagcaggtgacccgggtggcc
cgtgaggtgggcaccgaggggatcctgggtggtcaggccgaggtgcagggggtctccggc
acctggaaggacctcacccagtcggtgaacttcatggcgaacaacctcaccatccaggtg
cggaacatcgccgaggtcacgacggccgtcgccatgggcgacctctcgaagaagatcacc
gtcgatgcccggggcgagatcctggagctggtcacgaccgtcaacacgatggtcgaccag
ctgtcgaacttcgcggacgaggtcacgcgcgtggcacgcgaggtgggtacggagggcatc
ctcggcggccaggcgcgcgtacgcggtgtcaccggtacgtggaaggacctcagcgacaac
gtcaacctgatggccaacaacctgacgagtcaggtgcggaacatctcccgggtctcggcg
gccgtcgccaacggcgacctgacgaagaaggtgacggtcgaggcgcgcggcgaggtcgcc
gagctcgccgagaccgtcaacacgatggtgacgaccctgtcgtccttcgcggacgaggtc
acgcgtgtggcgcgtgaggtgggtacggagggcgaactgggcggtcaggcgcgggtgccg
ggtgtctccgggacctggaaggacctgaccgagtcggtgaactcgatggccgacaacctc
accggtcaggtgcggcagatcgccgccgtcaccaccgccatcgccaagggcgacctgacc
aagaagatcgacatcgacgcgcgcggtgagatccaggagctgaagaacaccatcaacacg
atggtcgaccagctgtcgaacttcgccgaggaggtcacgcgtgtggcccgcgaggtgggc
accgacgggcagctgggcggccaggcccgggtccgggacgtggagggcacctggagcgac
ctcaccgagtccgtgaacgagatggccgggaacctcacccggcaggtgcgggccatcgcg
gccgtcgccaccgcggtgacccgcggcgacctcaacgtcaagatcgacggtgtggacgcg
gccggtgagatccaggcgctccaggacaacatcaacacgatgatcgcgaacctgcgcgac
accacgctcgccaacgacgagcaggactggctcaagagcaacctggcccgcatctccggc
ctcatgcagggccggcgggacctcgacgacgtcgcctcgctcatcatgagcgagctgacg
ccggtggtctcggcacagcacggcgccttcttcgtcgccatgccgaccggtcacgcccac
agcgacgccgaactcgtcggtgagggcgacggctcgtacgagctgcggatgcgcgggagt
tacgggtactccaccgggtccatgccgacctcgttccgccccggtgagacgctcatcggg
acggccgccgaggagaagcggacgatccaggtcaacgtgccgccgggctatctcaagatc
tcctcggggctcggggaggcctcgcccgcgcatgtgatcgtgcttccggtgctcttcgag
ggcaaggtcctcggagtgatcgagctggcctcgttccagccgttcgcgcagatccagcgg
gacttcctcaaccagatcgccgagttgatcgcgaccacggtcaacaccatcagcgtcaac
accaagaccgaggtgctgctccagcagtcgcaggagctcaccgagcagctcaaggagcgc
tcggccgagctggagcaccggcagaaggagctccagggctcgaacctggagctggaggag
aaggcggagctgctcgcccggcagaaccgcgacatcgaggtgaagaacaccgagatcgag
gaggcccggcaggtcctggaggagcgcgccgaacagctcgccgtctccatgcggtacaag
tcggagttcctggcgaacatgtcgcacgagctgcgcaccccgctcaactcgctgctgatc
ctcgccaagttgctcgcggacaacgccgagaccaatctgacgccgaagcaggtcgagttc
gcggagaccatccacggtgccggttcggacctgctccagctgatcaacgacatcctcgac
ctgtcgaaggtcgaggcgggcaagatggacgtctcgccgacccggatcgcgctcgtccag
ctcgtcgactacgtggaggccaccttccggccgctcacggcggagaaggggctcgacttc
tcggtgcgcgtctcgcccgagctgccggccacgctccacaccgacgagcagcggctgctg
caggtgctgcgcaacctcctgtccaacgcggtgaagttcaccgactcgggtgcggtggag
ctggtgatccggccggccaacgcggatgtgccgcagtcgatccgcgagcagctcctggag
gcgggttcgctgcgtgatccggaggccgatctgatcgcgttctccgtgacggacaccggg
atcgggatcgcggcgagcaagatgcgggtgatcttcgaggcgttcaagcaggccgacggc
acgaccagccggaagtacggcggtacgggtctggggctctcgatcagccgggagatcgcg
cggctgctcggcggcgagatcttcgcggcgagcgagtcgggccgcggttcgacgttcacg
ctctatctgccgctgagcccgacggagctgccgtcgcacgggtacgggcagggggcgtcg
gacgccgaggacgtgcagcagggtgccgaggacgggtcggccggggccgtgcacgcgttc
ccgcacttcccgccggcgcccgtgcggaccgaggcgcggtcgggggccggggcgctgttc
cggcaccggcggaaggccgcggcggaggcgaccggggcgcggacggccgtaccggggcag
ttcggtcagcagggtgccgtggaccgggcggagccggaggcggaggtggagccccggcgc
accttcaacttctcgggcgagcgggtgctcatcgtggacgacgacatccgtaacgtcttc
gcgctcacgagcgtcctggagcagcacgggctcgcggtgctgtacgcggagaacgggcgc
gagggcatcgaggtcctggagcagcacgacgacgtgacggtcgtgctgatggacatcatg
atgccggagatggacgggtacgcgacgacgaccgcgatccggcggatgccgcagttcgcg
gggctgccgatcatcgctctgacggcgaaggccatgaagggcgaccgggagaaggcgatc
gagtcgggtgcctcggactatgtgacgaagccggtcgaccccgaccacctgctgtccgtg
atggagcagtggatgcggggggagtga
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