Streptomyces gardneri: H4W23_33495
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Entry
H4W23_33495 CDS
T07252
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4W23_33495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgx03019
]
H4W23_33495 (recQ)
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_33495 (recQ)
Enzymes [BR:
sgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W23_33495 (recQ)
Messenger RNA biogenesis [BR:
sgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H4W23_33495 (recQ)
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H4W23_33495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPK49070
LinkDB
All DBs
Position
7419938..7422001
Genome browser
AA seq
687 aa
AA seq
DB search
MVLSDESVQLSDASQVLQRVFGYSSFRGEQQEIIEQVVGGGDALVLMPTGGGKSLCYQIP
ALVRDGTGVVISPLIALMQDQVDALRALGVRAGFLNSTQDPYERQSVEQAFLADELDLLY
LAPERLRTEGTQRLLDRGKVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAARLGLEEARHFVAGFDRPNIQYRIVGKNNPLKQLLELIRTEHDGDAG
VVYCLSRASVEKTAAALVEQGIDAVPYHAGMDARARAANQSRFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKLIDGSEGDE
AHRRSLGMHLDAMLALCETVDCRRVRLLAYFGQSGEPCGNCDTCLTPAESWDGTVAAQKL
LSTVWRLAKERRQKFGAGQIIDIVQGKKTAKVIQFDHDALSVFGVGSDLGTAEWRGVVRQ
LLAQGLLTVEGDYGTLVLTENSGEVLGGRRTVPMRKEKAPAAAARKESGARSGKSARVPV
DLPAAAVPVFEALRAWRGATAREQGVPAYVVFHDATLREIATLFPTTVEQLGTVGGVGEA
KLAKYAEGVLAALAECGAPAPGPAQATGPAASAPASPAAPARAGSAGRAPAPRAATSGRA
APYDDEPPFDLDEPPADMDEFEPPWDE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggtcctttccgacgaatccgtccagctctccgacgcctcgcaggtgctccagcgcgtc
ttcggctacagctccttccgcggggagcagcaggagatcatcgagcaggtcgtcggcggc
ggcgacgcactcgtcctgatgccgaccggcggcggcaagtcgctgtgctaccagatcccg
gcgctcgtcagggacggcacgggcgtcgtgatctcgccgctcatcgcgctgatgcaggac
caggtggacgcgctccgcgccctcggcgtgcgggccggattcctgaactcgacgcaggac
ccgtacgagcggcagtccgtcgagcaggccttcctcgcggacgagctggacctcctctac
ctggcccccgagcggctgcgcaccgagggcacgcagcggctgctcgaccggggcaaggtg
tcgctcttcgcgatcgacgaggcccactgtgtcgcccagtggggccacgacttccggccc
gactatctggcgctctcgatgctccacgagcgctggcccaaggtgccgcggatcgcgctg
accgcgacggccaccgaggccacccacgccgagatcgcggcccgcctgggtctggaggag
gcccggcacttcgtcgccggcttcgaccggccgaacatccagtaccgcatcgtcgggaag
aacaacccgctcaagcagctcctggagctgatcaggaccgagcacgacggggacgccgga
gtcgtctactgcctctcgcgggcgtcggtggagaagaccgcggcggccctcgtggagcag
ggcatcgacgccgtgccgtaccacgcgggcatggacgcccgcgcgcgtgccgcgaaccag
tcccggttcctccgtgaggacggcgtcgtggtggtcgcgacgatcgccttcggcatgggc
atcgacaagcccgacgtgcgcttcgtggcccacctcgatctgccgaagtcggtcgagggc
tactaccaggagaccggccgcgccggccgtgacggcgagccggccacggcctggctggcg
tacggcctccaggacgtcgtccagcagcgcaagctcatcgacggctccgagggcgacgag
gcgcaccgccgctccctcggcatgcacctggatgccatgctcgcgctctgcgagaccgtc
gactgccgccgggtccggctcctcgcctacttcgggcagtcgggcgagccgtgcggcaac
tgcgacacctgcctgaccccggccgagtcctgggacggcacggtcgccgcgcagaagctg
ctgtccaccgtgtggcggctggccaaggaacggcgccagaagttcggcgccggccagatc
atcgacatcgtccagggcaagaagacggccaaggtcatccagttcgaccacgacgccctc
tcggtgttcggcgtcggctcggacctgggaaccgcggagtggcgcggcgtcgtccggcag
ctcctcgcccagggcctgctcacggtggagggcgactacggcacgctcgtcctgacggag
aacagcggcgaggtgctcggaggccggcgcacggtcccgatgcgcaaggagaaggcgccc
gccgccgcggcgcgcaaggaatccggggcgcgctccgggaagagcgcccgtgtgccggtc
gacctgccggccgccgccgtgccggtcttcgaggctctccgtgcctggcgcggggcgacg
gcccgcgagcagggcgtcccggcgtacgtcgtcttccacgacgcgacgctgcgcgagatc
gcgacgctgttccccaccacggtcgagcagctgggcaccgtcggcggagtcggcgaggcc
aagctggccaagtacgccgagggcgtcctcgccgcactcgcggagtgcggggccccggcc
ccgggtccggcccaggcgaccggacccgccgcatccgcacccgcgagcccggccgcaccc
gcacgtgcgggctccgccggtcgggcccccgcgcctcgcgcggcgacgtccggccgggcg
gcgccgtacgacgacgagccgcccttcgacctggacgagccgccggccgacatggacgag
ttcgagccgccctgggacgagtga
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