Streptomyces gardneri: H4W23_35415
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Entry
H4W23_35415 CDS
T07252
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03420
Nucleotide excision repair
sgx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4W23_35415
03430 Mismatch repair
H4W23_35415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_35415
Enzymes [BR:
sgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W23_35415
DNA repair and recombination proteins [BR:
sgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4W23_35415
MMR (mismatch excision repair)
Other MMR factors
H4W23_35415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QPK49374
LinkDB
All DBs
Position
complement(7827055..7828542)
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AA seq
495 aa
AA seq
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MSSPRPETPVLTPEQLLVAASPHRLLYIEAFPGSGKTTVSHQRFGLHRFARTTDHRAVVA
VSFTRSATEEIRSRVIRQWGPSALAWPHRIVTLDTVLNDLLTHLLRSRVLQWPGSHEELE
VLDTWPTHLPTIRTKAKPVLRLAGTRIITTYQQEDEPGYHIRPSDFAAAVGDGRCTHENV
REVLQDALGMEDVRARVAAYFSMAIRSLLVDEVYDANDLDVEVIRVAADAGLAVTLVGDP
WQALYAFRGARPESVRRLLGLLRFERGRLQTTFRWRDSTTQMSLAQRLRRGEGTVLTEAA
ANDVDVVLARKWQSLWDGDPQVLPLAAKWKTEPLQKAMCTLLLNELTQRALGLPALFLTD
ARTTLGVEETEAFEELRPDLQSALQRLSSQDDLAEIWTALVGTVAAKSHIELSERHKRTP
RKALGHLRMRLEVSHERLVPGLTCHQAKGREWDKVGVRLEHSDAAALRKGLDSEDEAHRA
LYVALTRARHLSVAV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagtccccgacccgagacccccgtcctcacgccggaacaactccttgtcgccgcg
agccctcaccgactcctctacatagaagcgttcccgggttcggggaagacgaccgtctcg
caccagcgcttcggcctgcaccgcttcgcgcgcacgaccgatcacagggcggtcgtggcg
gtcagtttcacccgctcggccactgaggagatacgcagccgcgtgatccgccagtggggg
ccttcggcactggcctggccccatcgcatcgtcacactcgacaccgtcctgaacgacctg
ctcacccacctcctcaggtctcgggtcctccagtggccgggcagccatgaggaactagag
gtgctggacacatggccgacccacctgcccaccattcgtacgaaagcaaagccggttctc
cgcctcgcgggcacccgcatcatcaccacctaccagcaggaggatgaaccgggttaccac
ataaggccctcggacttcgccgcagcggtgggcgacgggcggtgcacccacgagaacgtg
cgtgaggtcctgcaagacgccctcggcatggaggacgtccgcgcccgggtggcggcctac
ttcagcatggcgatcaggtcgctgctcgtcgacgaggtctacgacgcgaacgacctggac
gtggaggtcatccgcgtcgcggcggacgccggtctggccgtcaccctcgtgggagaccct
tggcaggccctctacgcctttcgcggcgcccgcccggagagcgtgcgccggctactcgga
ctgctgagattcgaacgcggccgactccagaccacgttcagatggcgcgacagcactacc
cagatgtcactggcacagcgactgcgccgcggggaagggacggtcctcaccgaggccgcg
gcgaacgacgtcgatgtcgtgctcgcacgaaagtggcagtcgctgtgggacggagaccct
caagtactcccccttgccgccaagtggaagacggaaccactccagaaggccatgtgcacc
ttacttctgaacgaactcacccagagggccctcggtctgccggccctcttcctcacggac
gcccggaccactctgggcgtggaggagaccgaggcgttcgaggaactgcgtccggacctg
cagagcgcgctccaacgcctttcgagtcaggacgacctcgccgagatctggaccgccttg
gtaggtaccgtggccgccaaatcgcacatcgagctgtcggagaggcacaagcggacaccc
cgcaaggctctcggccacctgcgcatgcgcctggaggtctcgcacgagcgactggttccc
ggcctgacctgccatcaggcaaagggcagggaatgggacaaggtcggggtgaggctggaa
cactccgacgcggccgcgctccgcaagggactcgactccgaggacgaggcccaccgcgcg
ctctacgtcgcactcaccagggcacggcacctaagcgtcgcggtatga
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