Streptomyces gardneri: H4W23_38370
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Entry
H4W23_38370 CDS
T07252
Name
(GenBank) caspase family protein
Organism
sgx
Streptomyces gardneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Peptidase_C14
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
AAA_16
nSTAND1
NACHT
Vgb_lyase
NPHP3_N
Beta-prop_HPS5
WD_LRWD1
AAA_22
SLFN-g3_helicase
AAA_30
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QPK49894
LinkDB
All DBs
Position
complement(8571396..8575637)
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AA seq
1413 aa
AA seq
DB search
MAYAMTAGVGAEDAGRRFLLTVGVRHYQDETISDLTGVTADVEKVRGLFRPMGYETVMPS
LSTDPTADEVRRGIDRWTTAAELGPRDVVLLYFAGHGVHSVDRHYLLFSDTERGLWDGTA
LASEDFGRPLVRSAVGHLLIVLDTCFAGAGTADITSLAASLARTRSPEPAGRWLMAAARG
KERATENAFVSALTHVLAHPKAGARQEFVSVRDVTRGINGYFAEHHPAQHARYTTVDSDG
HAPFFPNPAFLPGLPANDLDVRTMARLRQESRGHFDPRGRGVGHAAEAGDFFRGRRAALA
SIAAWLAADTHDRRAKVVTGDPGSGKSAVLGRVLRLSDPEERSTTVAADDTLPPGNPEVL
ALHARRRTCEELTARMAAALALPTASLDELLQGVSERQRPLTVVIDALDEAGPAGDATEA
KRVARELCLPLSTLPAVRLLIGTRRPVVPHLGRAVDVLDLDVERWNEPSDMIEYASDLIL
GGVPADADGSGPPAAPGAEPDPARVAWASLVARGIAARAGNCFLVARMTARAVVDGRLDI
DVTRPGWEELLPRDAVDAFDAYLDSFGDSARLVRRLLRPLAYAQGRGLPWSTVWAPVAAA
LSGKRCSDEDVQWLLETAGSYIIEESTSYGSAYRLFHESLASALRSPGRDTEAHRSIAGA
LTADVTVDPWTGEREWGTAHGYIKEHLAAHAAAGGALDPLLQDTDYLVHARPDALVRVLG
QARGSAARRAAGIYRASVSIHRRVSPQERSDVLAIDAARSRQPVLSERFARSRPWKPRWA
TTGLAQGPASSGHTEPVHAVSSGTFAGRLHIVTASHDETVRVWELPDLMTPELRATLSGH
RAPVRALATVEVGGDRCVLTGASDHTVRLWNLSDPSDPALLAVFEGHTGPVRSIAAVALD
GRPHALTASDDGSVVLWDLDVRRRRATLTGHDSGVRSVDCAVLDGLPIAVTAGHDGTVRA
WDLADGAGGHESRVLFTGARPVLCVAWTVVDGSPAVVHGDHSGLVRLQSLSGEGEPADGE
PVCLSGHTGPVRAVSCTTLDGRPHAVTAADDGTVRVWDLSTHETRSVLSAKNEWVRGLEV
FHVAGNPYAFARPDDHTTRLWDLRTGTMRATLSGRSSWVRTVTPVRTGGGRHLLVGGDDR
TARVWDVGGEPFSGTEPVATFQDHTDWVRASDSIEVDGVALAVTGGNDGTLRVWEHHTGL
PRHVLQGHSGCVRGVACAVVDGRPVAVTVGEDRTVRVWDVRTGAALFTLPGHDDWVCAVS
CTTVGGVPFAVTAGDDATVRLWDLRNREGTAVLRGHQGWVRAVACLDVDGRPHAVTAGHD
GTLRLWDLASPRHAARIAEGSGPLWAVASGVWQGQPHVVATGRDRVVRVWRLQDRGLVSQ
VRLPLTCDTLAVADRDLVLGMRSDTVVLSPADV
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgccatgacggctggggtcggggcagaggacgccgggcgccggttcctgctc
acggtcggagtgcgccactaccaggacgagaccatcagcgacctcaccggcgtcaccgcc
gacgtcgagaaggtccgtggactcttccgtcccatgggctacgagacggtgatgccctcg
ctctccaccgaccccacggcggacgaggtccggcgcgggatcgaccggtggaccaccgcc
gccgagctcggtccgcgtgatgtggtgctcctctacttcgcggggcacggcgtccacagc
gtcgaccgccactacctcctcttctccgacaccgaacgcggcctgtgggacgggacggcc
ctggccagcgaggacttcggcagacccctcgtccgcagcgcggtcggtcatctcctcatc
gtcctcgacacctgtttcgccggggcgggcaccgccgacatcacctcgctcgccgcctcc
ctggcccgtacgaggtccccggaaccggccgggcgctggctgatggccgccgcgcgcggc
aaggagcgcgcgacggagaacgccttcgtcagcgccctcacccatgtcctcgcccacccc
aaggccggcgcgcggcaggagttcgtgagcgtccgggacgtgacccgcggcatcaacggc
tacttcgccgagcaccaccccgcccagcacgcccggtacaccaccgtggacagcgacggg
cacgcgcccttcttccccaatccggccttcctccccggccttcccgccaacgatctggac
gtccggacgatggcccgactgcggcaggagagccgcggtcacttcgacccgcgcggacgg
ggagtggggcacgccgcggaggcgggggacttcttccggggccgcagggccgcgctggcc
tccatcgccgcctggctggcggccgacacccacgaccgccgggcgaaggtggtcaccggg
gatcccggttcgggcaagtccgccgtcctcggcagggtgttgcggctgtccgatcccgag
gaacggagcacgaccgtcgcggcggacgacaccctcccgcccggcaaccccgaggtcctc
gccctgcacgcccggcgccgcacctgcgaggagctcaccgcccggatggcggcggcgctg
gcgctgccgaccgcctcgctcgacgagctcctccagggggtcagcgagcggcagcgcccc
ctgacggtggtcatcgacgccctcgacgaggccggcccggccggcgacgcgaccgaggcc
aagcgggtcgcccgtgagctgtgcctcccgctgtccaccctgcccgccgtacggctgctg
atcggcactcggcggccggtcgtgccccacctgggccgcgcggtcgacgtgctcgatctc
gacgtcgagcggtggaacgagccctcggacatgatcgagtacgcgtcggacctcatcctc
ggcggagttccggccgacgccgacggctcaggaccgcccgcggcaccaggggcggaaccg
gatccggcccgtgtcgcctgggcctcgctcgtggcccgcgggatcgccgcccgggcgggg
aactgcttcctcgtggcccggatgaccgcacgggccgtggtcgacggtcggctggacatc
gacgtgacgcggccggggtgggaggagctgctgccccgggacgccgtcgacgccttcgac
gcctacctggactccttcggcgactcggcccggctcgtccgcagactgctgcgcccgctg
gcctacgcccaggggcgggggctgccctggtccacggtgtgggcgcccgtcgccgcggcg
ctgtcgggcaagaggtgcagcgacgaggacgtccagtggctgctggagacggcgggctcc
tacatcatcgaggagtccacctcgtacggctccgcgtaccgcctcttccacgagtcgctg
gcctcggcgctccggagccccggccgagacacggaggcccaccggagcatcgccggggcg
ctgacggcggacgtcacggtcgatccgtggaccggcgagcgcgagtggggcaccgcacac
ggctacatcaaggagcatctcgccgcgcacgcggcggccggaggggccctcgacccgctc
ctccaggacaccgactacctggtccacgcccgtcccgacgccctggtccgggtcctcggc
caggcgcgcggttccgccgcgcgccgcgcggccggcatctaccgggcctccgtcagcatc
caccgccgggtgtcgccgcaggagcggagcgacgtactcgccatcgacgcggcgcggtcc
cggcagccggtgctctccgagcggttcgcccgctcccgcccgtggaagccccgttgggcg
acgacgggcctcgcgcagggtccggcgtccagcgggcacaccgagccggtgcacgccgtg
tccagcgggaccttcgccggccggctgcacatcgtcaccgccagccacgacgagacggtc
cgggtctgggagctgcccgatctcatgacgcccgagctgcgcgcgacgctgtcggggcac
cgcgcgccggtacgggccctcgcgacggtggaggtgggcggcgaccggtgcgtcctgacg
ggtgccagcgaccacacggtccggctgtggaacctgtccgacccctccgaccccgctctc
ctcgccgtgttcgaagggcacaccggccccgtacggtcgatcgccgccgtcgccctcgac
ggccggccgcacgcgctgacggcgagcgacgacggatccgtcgtcctgtgggacctggac
gtgcggcggcggcgtgccacgctcaccggtcacgacagcggggtgcggtccgtggactgc
gcggttctggacggcctgccgatcgcggtgaccgccggccacgacgggacggtgcgggcc
tgggacctcgcggacggcgccggcggccacgagtcgcgcgtgctgttcaccggtgcgcgc
ccggtgctctgcgtggcgtggaccgtggtcgacggctcccccgcggtggtccacggcgat
cacagcggtctcgtacgactgcagtccctgtccggcgagggcgaacccgccgacggggaa
cccgtgtgcctcagcggccacaccggccccgtacgcgcggtgtcctgcaccacgctggac
gggcgtccgcacgccgtcacggccgccgacgacgggaccgtacgcgtctgggacctgtcc
acccacgagacccggtccgtcctgtccgcgaagaacgagtgggtccgcggtctggaggtc
ttccacgtcgccgggaacccgtacgccttcgcccggcccgacgaccacaccacgcgcctg
tgggacctccggacgggaacgatgcgcgcgaccctgagcgggcgcagcagttgggtccgc
acggtcaccccggtgcggaccggcgggggacggcacctgctcgtcggaggtgacgaccgt
acggcacgggtgtgggacgtgggaggggagccgttctccggcacggagccggtcgcgacg
ttccaggaccacaccgactgggtccgtgcctccgactcgatcgaggtcgacggcgtcgcg
ctggcggtgacgggagggaacgacggcaccctgcgcgtgtgggagcaccacaccgggctt
cctcggcatgtgctccagggacactccggttgtgtacgcggtgtggcctgcgccgtcgtg
gacggccgtcccgtggcggtgacggtgggcgaggaccgcaccgtgcgggtgtgggacgtg
cggacgggcgcggcgctcttcaccctgccgggccatgacgactgggtgtgcgcggtctcc
tgcaccacggtcggcggtgtgccgttcgcggtgacggccggggacgacgcgacggtgagg
ctctgggacctgcggaaccgcgaggggacggcggtgctgcgcgggcaccaggggtgggtg
cgggccgtcgcctgtctcgatgtcgacggccgcccccacgcggtgaccgccggccacgac
gggaccctgcggctctgggacctggcgtcgccgcgtcacgcggcccggatcgcggagggt
tccggcccgctgtgggccgtggcgtccggcgtctggcagggccagccgcacgtcgtggcc
accggccgcgaccgtgtcgtccgtgtgtggcggctgcaggaccggggcctcgtctcccag
gtccggctgcccctcacgtgcgacacgctcgcggtcgcggaccgggacctcgtcctgggc
atgcgcagcgacacggtggtgctgtccccggccgacgtctga
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