Streptomyces gardneri: H4W23_39020
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Entry
H4W23_39020 CDS
T07252
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sgx
Streptomyces gardneri
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgx03400
]
H4W23_39020
Enzymes [BR:
sgx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H4W23_39020
DNA repair and recombination proteins [BR:
sgx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H4W23_39020
Prokaryotic type
H4W23_39020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QPK50012
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All DBs
Position
8724622..8725995
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AA seq
457 aa
AA seq
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MNVSIVLFTSDLRLHDHPPLRAALASASEVVPLFVRDRAVDRVGFAAPNRLAFLADCLTD
LDAGLRARGGRLVVRHGDTVAEVCAVARETDADEVHMAAGCTAFAHERERRLRHALERDG
RRLYVHDGVVTVLPAGEVTPAGSDHFAVFTPYHRRWSAEPPRSPAAAPRSVPVPGGLRSD
EVPSRTAVASVSEGLAVGGERKGRERLTAWLSRYVDSYEDRHDDLAGDVTSRLSPYLHFG
AVSANEVVHRARSRGGAGAAAFVRQMCWRDFHHQVLNARPHAATEDYRTRHDRWRHGKQA
EADLRAWQEGRTGYPLVDAAMRQLAHEGWMHNRGRLLAASFLTKTLYLDWRLGARHFLGL
LVDGDVANNQLNWQWAAGTGTDTRPNRVLNPVLQARRYDPEGVYIRRWVPELAALTTPMV
HEPWKLPPLDRAAVDYPDPIVALADGLGRFRRARGQD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcgatcgtcctgttcacctcggatctccggctccacgaccacccgcccctg
cgggccgccctcgcgtcggcgtccgaggtggtgcccctcttcgtccgtgaccgggctgtc
gaccgggtcggcttcgccgcgcccaaccggctcgcgttcctcgccgactgcctgaccgac
ctggacgccgggctccgcgcccgtggcggccggctcgtcgtacggcacggcgacaccgtg
gccgaggtgtgcgccgtggcccgggagaccgacgcggacgaggtccacatggcggccgga
tgcaccgcgttcgcacacgagcgggagcggcggctgcgacatgccctggagagggacggt
cgccggctgtacgtccacgacggggtcgtcaccgtgctgccggccggtgaggtcaccccg
gccggatcggaccacttcgcggtgttcaccccgtaccaccggcgatggtcggccgagccg
ccgcgctccccggccgcggcgccccgatccgtgccggtgcccggcggtctgcggtccgac
gaggtgccctcgcgcacggccgtcgcgtcggtctccgagggactggcggtcggcggcgag
cgcaagggccgcgagcggctcacggcctggctgtcccggtacgtcgactcctacgaggac
cggcacgacgacctcgccggtgacgtcacctcccgtctctccccgtacctgcacttcggc
gcggtctccgcgaacgaggtggtgcaccgcgcacggtcccggggcggggcgggcgcggcg
gcgttcgtccgccagatgtgctggcgggacttccaccaccaggtgctgaacgcccgcccg
cacgccgccacggaggactaccggacccggcacgaccgctggcggcacgggaagcaggcc
gaggcggacctgcgggcatggcaggagggccggaccggctaccccctggtggacgccgcc
atgcgtcaactcgcccacgagggttggatgcacaaccggggcaggctgctcgcggcctcg
ttcctgaccaagacgctctacctcgactggcggctcggagcccgccacttcctcggtctc
ctcgtcgacggcgacgtcgcgaacaaccagctgaactggcagtgggccgcgggcacgggc
accgacacccggcccaaccgggtcctcaaccccgttctccaggcgcggagatacgacccc
gagggcgtgtacatccgccgctgggtccccgaactcgccgccttgacgactccgatggtc
catgagccgtggaagctgcccccgctggaccgggccgctgtcgactaccccgacccgatc
gtggcgctcgccgacggcctgggccgcttccggcgcgcccgcggccaggactga
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