Syntrophobotulus glycolicus: Sgly_0642
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Entry
Sgly_0642 CDS
T01429
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
sgy
Syntrophobotulus glycolicus
Pathway
sgy00550
Peptidoglycan biosynthesis
sgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sgly_0642
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgy01011
]
Sgly_0642
Peptidoglycan biosynthesis and degradation proteins [BR:
sgy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Sgly_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
DUF3724
Motif
Other DBs
NCBI-ProteinID:
ADY55004
UniProt:
F0SZZ3
LinkDB
All DBs
Position
624130..626178
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AA seq
682 aa
AA seq
DB search
MIQYVRMHKRIVFLFAICSIFLLVLVVRLGIVQLRDGPFLKGIADDYHFRGVPVAPKRGN
IEDCNGNVLAMSVSTQTVYAIPAEVKKSGRGDEIADKLAKILGENKEDILKRITKRSSLE
YVKKKIPAENAAEIKQANLPGIGVVEDSSRYYPNQTLAAHILGFVGIDSQGLEGIEFSRN
KELTGIAGSILTEYEANGIEMPNALQQYVDPIQGNTVKLTIDKNIQAFAQRELDQLMSGQ
GQNMEGKVPKSASILVMEPSTGRMLAIASAPTFDPNNYKDADQSTRRNAAIQNGYEPGST
FKIITLAAALEEKVISKEERFYDSGSYTVLGKNIHCWKSGGHGSQTFTEVAENSCNPGFI
EMGQRLGTGKFYQYLTAFGFGEKTGIEMSGEATGILRNKKKATALDLATMSIGQTNNVTP
IQLLTAVSAVANGGVLMKPQLVQEIINPQGEVVVPFAKQEVRRVISKDTAKLEREILESV
VTNGTGRRAFLPGYRVAGKTGTAQKVANGSYVQGEYIASFISFAPADNPRLAILAVVDGV
SFYGGTVAAPIVQSVMLDSLKYLGVKPDMGAPLTPKPLYGVEFPIIKKAAEVPSVLGQPL
ADAQEALKKAGFQVMTEGSGNTVIDQIPHAEASVEQGSSILLYLGTEAGKQTLGSWWREI
DEDVEAIESIGPRIPLNENENK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatccaatacgttcgtatgcataaaagaatagtgttcctctttgcaatatgttcgata
tttctactggtgttggttgtcagacttggcatcgttcagttaagagatgggccgtttcta
aagggaattgcagatgactatcactttcggggagtgcctgttgcgccgaaaagaggcaat
atcgaagactgcaatggcaatgttctggcgatgagtgtcagcactcaaactgtttatgca
attccggctgaagtaaaaaaatccggccgcggtgatgaaatcgcagataagcttgccaaa
attctcggggaaaacaaggaggacattttaaagaggatcaccaaaagatcttccttggag
tatgtaaaaaagaagattcctgcggaaaacgcagctgaaatcaagcaggccaacctgccc
ggaattggggtagtcgaagatagcagcaggtattatcccaatcagaccctagccgctcat
attttaggatttgtcggaattgacagtcagggacttgaagggatagaattttctaggaat
aaagagctgaccgggattgccgggagtattctcacagagtatgaagcaaacggcattgag
atgcccaatgctttgcagcagtatgtggacccgattcagggcaatacggtaaaattaacg
attgacaaaaatattcaggcttttgcccaaagagaattagatcagctcatgtccggtcag
ggacaaaatatggaaggcaaagtgcccaagagtgcttcgattttggtgatggagccctct
accggaaggatgctggcgatcgcaagcgcacccacttttgacccgaataactacaaggat
gccgaccaaagcacccgcagaaatgcagccattcagaatggctatgaacccggctcgaca
ttcaagattatcaccctggcagcggctcttgaagaaaaggtgatcagtaaagaggagcgt
ttttatgactcgggctcttatactgttctggggaagaatatccactgttggaaaagcgga
ggacatggcagccagaccttcactgaggttgcggaaaattcctgtaacccgggatttatt
gaaatggggcaaaggctgggtacgggtaagttttatcaatatttgacagcgttcggtttt
ggagaaaaaacggggattgaaatgtccggcgaggcaaccggtatcctccgcaataaaaag
aaagctacggccttggatctggcgacaatgtccatcgggcagaccaataatgtcactccg
atccaactgctgaccgcggtaagtgcggtggccaacggtggagtcctgatgaagcctcag
cttgttcaggaaatcatcaatccacagggagaggtcgtcgttcctttcgccaaacaagag
gttcggcgtgtaatcagtaaagataccgcaaaattggaaagagagattctggaatcagta
gtgacgaatggaaccgggcgcagagcttttttgccgggatacagagtggcgggcaagaca
ggcacggcgcagaaagtagcgaatggctcctatgtgcagggagaatatattgcctccttt
atcagctttgcaccggcggataatccacgcttggcaattctggccgttgtagacggggtt
tcattttatggcggtacggtcgctgccccgatcgtccagtctgtgatgctggattctctg
aaatatttgggagtaaaacccgatatgggcgcccctctcaccccaaagcctctgtatggg
gtagagtttcctatcattaaaaaagcagctgaggttccttctgttttagggcagccgctg
gccgacgcccaggaagctttgaaaaaagcggggtttcaggtcatgaccgaaggcagcgga
aatacggtgatcgatcaaattcctcatgccgaggccagtgttgaacaaggctcctccatt
cttctttatctgggtacggaggcggggaaacaaacacttggctcgtggtggcgggaaatt
gacgaagatgttgaagcgatagaatcaatcggcccaagaataccgctcaatgaaaatgag
aataaatag
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