Syntrophobotulus glycolicus: Sgly_2248
Help
Entry
Sgly_2248 CDS
T01429
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgy
Syntrophobotulus glycolicus
Brite
KEGG Orthology (KO) [BR:
sgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgy03016
]
Sgly_2248
Enzymes [BR:
sgy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sgly_2248
Transfer RNA biogenesis [BR:
sgy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sgly_2248
Prokaryotic type
Sgly_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADY56537
UniProt:
F0SU14
LinkDB
All DBs
Position
complement(2286932..2287828)
Genome browser
AA seq
298 aa
AA seq
DB search
MDGIVNVLKPVGMTSTDVVYWLKRKLKVNKAGHIGTLDPGAAGVLPICIGKAARLAEYHT
MQTKAYRAEIKFGITTDTEDSFGRILTQTKTEISRKDFLQVTSNFLGDICQIPPMYSSVR
IQGKHLYDYARKGLEVDRPERQVSIDKLDLVEWYDEEYPRAIFDVTCSKGTYIRTLCTDI
GQAMGCGAHMSFLVRTCSGVFGIEESRTFSEIELMLAEGSRDFLYPLDFGLALPKAEIPD
HRVQAFKNGLPSSGLVPEEDWGEEKPLQVIARDAGSGEMIFCGIGIWKEDSLFPYKVL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttggacggaatcgttaatgtcttaaaaccggtcgggatgacttcgacagatgttgtatac
tggctgaaacgaaagctgaaagtaaacaaagctggccatatcggaactttggacccgggc
gcggcaggggttttgcccatttgtatcggaaaagccgccaggctggcagaatatcataca
atgcagacaaaggcttacagggcggaaatcaaattcggaatcacgacagataccgaagac
agctttggccgaatacttacgcaaaccaaaacggagatctcccgaaaagattttttgcag
gttacatcaaattttttaggggatatttgccagattcctcccatgtactcttcggtgcgg
attcaaggaaaacatttatatgattatgcccggaagggattggaagttgacaggccggaa
cgccaggtctccattgataagctggatcttgttgagtggtatgatgaggaatatccgaga
gcgatatttgatgttacttgttccaaagggacatacatcaggactctttgcacagatatc
ggacaggctatgggctgtggtgctcatatgtcttttttggtcagaacctgttccggtgtc
tttggtattgaggaaagccgcactttttccgaaatagaattgatgctggcagagggcagt
cgggattttttatatcccctggattttgggttggctttaccgaaggcggaaattcccgat
catagggttcaggcctttaaaaacggattgccatcctcgggccttgttccggaggaggac
tggggagaggaaaaaccactgcaggtaatcgccagggatgctggctccggtgaaatgatt
ttttgcggaatagggatttggaaagaagacagcttgtttccttataaagtattgtaa
DBGET
integrated database retrieval system
