Syntrophobotulus glycolicus: Sgly_2275
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Entry
Sgly_2275 CDS
T01429
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgy
Syntrophobotulus glycolicus
Brite
KEGG Orthology (KO) [BR:
sgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgy03032
]
Sgly_2275
03400 DNA repair and recombination proteins [BR:
sgy03400
]
Sgly_2275
Enzymes [BR:
sgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sgly_2275
DNA replication proteins [BR:
sgy03032
]
Prokaryotic type
DNA Topoisomerases
Sgly_2275
DNA repair and recombination proteins [BR:
sgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sgly_2275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Zn_ribbon_PaaD
DNA_ligase_ZBD
Toprim_4
Zn_ribbon_RPB9
DmmA-like_C
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
ADY56564
UniProt:
F0SUB4
LinkDB
All DBs
Position
complement(2315067..2317166)
Genome browser
AA seq
699 aa
AA seq
DB search
MPKTLVIVESPAKAKSISKFLSKNYQVKASMGHLRDLPKSQMGVNIEHDFEPKYIPIRGR
GDLIKELKAAAKTADQVLLASDPDREGEAIAWHLMHLLGINQEKSSRVEFHEITKPTIQK
AIKNPRKIDLHKVDAQQARRVLDRLVGYKLSPLLWKKIKKGLSAGRVQSVAVRLICDREE
EIKVFESQEYWTLLAQFLCPGGNFSAKLIHKAGKRIEIKSRQEVDEIIVQLRRAVCVISD
VKNREKKKQPSPPFTTSSLQQEAYRKLNFAPKRTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSVRISELAQDEAKEYILASFGSDFYPGRQNYTSKRRTQEAHEAIRPTSVLRTPDSAKE
FLSRDQLRLYRLIWDRFLASQMSAAVYDTLTVDVAADKYTLRANASTVKFPGYLSVYEES
TDETEEKQDGDDRCLKVNVTPGQKVELAEIKEKQHFTEPPPRYTEASLVKKMEEEGIGRP
STYAPTIDTVQTRGYVVKEERKLVPTELGEIVVSLLKEHFKDIVDLEFTANMEEKLDNIE
EGQTQWKSVIRDFYIPFEETLNKAEAIIGKIKVEDQESDVLCEFCGRRMVIKMGRFGKFL
ACPGFPDCKNAKPLLEEVGVNCPQCGEKLVVRRSKKGRKFYGCSNYPECNFISWEKPAPV
NCPDCNSLMTEKTIKQKVNYVCTNKDCRHTEEKVEEKKE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaactctggtcattgtagaatccccggccaaagcgaaatcaatcagcaagttt
ttatccaaaaactatcaggtcaaagcttctatgggccatttgcgggatttgcccaaaagc
caaatgggcgttaatattgagcatgattttgaaccgaaatatatcccgatcagaggcaga
ggcgatctgatcaaggagctgaaggcagcagcgaagacggcagatcaagttctgctcgct
tctgacccggaccgtgaaggggaagcaatagcatggcatttgatgcaccttctggggatt
aatcaagaaaaaagcagcagagtagaatttcacgaaataacgaaaccaacgattcagaaa
gccataaaaaatccccgcaaaattgatctgcataaggttgatgctcaacaggcccgcaga
gtattggacaggctggttggctataaattaagccccctcctttggaagaaaattaagaaa
ggtctcagcgcaggccgggtccaatctgtagcggtgcggcttatctgcgacagagaagag
gagattaaggtttttgagtctcaggagtactggacactgcttgcccaatttctttgtccg
ggggggaatttttccgccaaattgattcacaaagcgggaaaaaggattgagatcaaatcc
agacaggaagttgatgaaatcatcgtacagctccgcagagctgtctgtgtgatcagcgat
gtcaaaaacagagagaaaaagaagcagccttccccgcctttcacgaccagcagtttgcag
caggaggcctatcggaaactgaattttgccccgaaaagaacgatgatgctggctcagcag
ctctatgaaggaatcgatttgggcaaagaggggacggttggcctgatcacttatatgaga
acagattctgtacgcatatcagagcttgcccaggatgaggccaaagagtatatcctggcc
agttttggttcggatttttatccgggccggcagaattataccagtaagcgcagaacccag
gaagcccatgaggcgattcggccaacttctgttttgcgtacgcctgattcggccaaagaa
tttttgagcagggatcagttgaggttgtacaggctgatctgggacaggttcttagcaagc
cagatgagtgcggcggtatatgatacgctaacggtcgatgttgcggcagataagtatacg
ctcagggctaacgcttcaaccgtaaagtttcccggttatctttctgtttatgaggaaagt
actgatgaaacggaagaaaaacaagacggggatgatcgttgtctgaaagtaaatgtgact
ccgggccaaaaggtggaactagcggagatcaaagaaaaacagcattttacggaaccgcct
ccccgctatacggaggcctctttggttaaaaaaatggaagaagaaggaatcggaaggccg
agtacttatgctccgactattgacacggtccaaaccagaggctatgtcgtgaaggaagag
aggaagctggtgcccactgaactcggagaaatcgttgtttccctgctcaaagaacatttt
aaagatattgttgatctggaatttaccgcgaatatggaagagaaacttgataatattgaa
gaaggccagacccaatggaaatccgtgatcagggatttttacattccttttgaagaaaca
ctgaacaaagcggaagccatcattggaaagataaaggttgaggatcaggaatctgatgtt
ttatgcgagttttgcggacggagaatggtcatcaaaatggggcgtttcggcaaattctta
gcctgtccgggattcccggactgcaagaatgccaaacctttgctggaagaagtaggtgtc
aattgtccgcaatgcggtgaaaagcttgttgtcagaagaagtaaaaaaggacgtaaattt
tacggctgcagcaattatccggaatgcaattttatttcctgggaaaaacccgctccggta
aattgcccggattgcaacagcttaatgacggaaaagacgattaagcagaaggtaaactat
gtttgtacaaataaagattgtcggcacacggaagagaaggttgaagagaagaaagagtag
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