Syntrophobotulus glycolicus: Sgly_3244
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Entry
Sgly_3244 CDS
T01429
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sgy
Syntrophobotulus glycolicus
Pathway
sgy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sgly_3244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgy03400
]
Sgly_3244
DNA repair and recombination proteins [BR:
sgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sgly_3244
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sgly_3244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_21
Zn_Tnp_IS91
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADY57508
UniProt:
F0T280
LinkDB
All DBs
Position
complement(3277304..3280138)
Genome browser
AA seq
944 aa
AA seq
DB search
MAQEYIKVRGARVHNLKNMDVDIPRNKLVIVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDDIEGLSPAISIDQKTTTRNPRSTVGTVTEIYDYLRLLYARIGHP
HCPKCGKEISQQTIQQMVDQLLTYPEKTRMQILSPVVRGKKGEHTKLLEQTRKNGYVRVR
IDGEMRDLSEEITLEKNKKHAIEVVVDRISLKKDESAARLADSLETALKLAEGTVVIDVI
DHEELLFSENFACPDCGIALEEISPRLFSFNSPYGACPACTGLGANLEADIGLIIPDRSK
SINEGAIVPWAKSSSNYYPALLEGLAEKLGFSMDRPVQDFTEEQWQALVYGSDVPIRFTY
HNIFDELKVWKAPFEGLIPYFQRRHKESTSDYVRSEIESYMTEKPCPVCAGKRLKPEALA
VKVGRISIVEMTDLNISELLEFIQLLQLSEKEQVIARQVLKEIKERLGFLVNVGLDYLTL
GRAAGTLSGGEAQRIRLATQIGSSLTGVLYVLDEPSIGLHQRDNARLLSTLKNLRDLGNT
LLVVEHDEDTMLEADHIIDIGPGAGAHGGKIIAQGTVAEIKEVPESITGQYLSGKRKIAV
PEERRTANGKWLEVKGAAENNLQGITAKIPVGLFTCVTGVSGSGKSSLVNEVIYKGLMNE
IGQSSRIKPGKYEQIKGLEYVDKVIDIDQSPIGRTPRSNPATYTGVFDLIRELFSQVPEA
KIRGYKQGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICRGQRYNRETLEVRYK
GKNIAEVLDMTVEEALAFFSAVPRIARKLQTLFDVGLGYIKLGQPATTLSGGEAQRIKLA
TELSRRSTGKTIYILDEPTTGLHIADVDKLLLVLHRLVEAGDTVLVIEHNLDVIKTADYI
IDLGPEGGNRGGEIVAEGTPTEIARNKKSHTGHYLVKALEQGKS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggagtatatcaaggtgcgcggtgcacgtgtgcataatttaaaaaatatggat
gtagatattccccgcaataagctggtgattgttaccggcttatccggctcagggaaatcc
tctcttgcttttgacaccatctatgccgaagggcaaagaagatatgtggaatccctttcc
gcttatgcgcgtcagtttttgggacaaatggacaagccggatgtcgatgatattgaaggg
ttatctcccgcaatttccatagatcagaagacgactacccgcaatccccgttcgacagtc
ggaaccgtgacggaaatttatgattatctgaggcttctttatgccagaatcggccatcct
cattgtcctaaatgcggcaaggagatcagccagcaaacaatccagcaaatggtggaccaa
ctgctgacctatcctgaaaaaaccagaatgcagattctgtctcctgttgtcaggggtaaa
aaaggggagcataccaagcttttggaacagacgcgcaaaaacggttatgtacgggtgcgg
attgatggagaaatgcgtgatctcagtgaagaaataaccttggaaaagaataaaaaacat
gcgattgaggtagtggttgacaggatttccctgaaaaaggatgaaagtgccgcccgtctg
gcggattctttagaaacagctcttaagctggccgaagggacagtcgttatcgacgtgatc
gatcatgaggagcttttattcagtgagaattttgcctgtccggattgcgggattgctctg
gaagagatttcgccaaggctgttttcttttaacagcccttatggagcttgtcccgcttgt
accggtctgggcgctaatttggaagcggatatcggcttgatcataccggaccgcagtaaa
tcaattaatgaaggagccatcgtaccctgggcaaaatcaagctcgaattattatcccgct
ctgttggaagggctggccgagaaattggggttcagcatggaccggcccgtccaggatttt
acggaagaacagtggcaggctctggtatatggttccgatgtccccattaggttcacctat
cacaatatttttgatgagctaaaggtttggaaggcccctttcgaagggttgattccatat
tttcagcgcagacacaaggaatccacctcagattatgtccgttcggagatagaaagctat
atgacggaaaagccatgtccggtctgtgccggaaaacgcctgaaaccggaagcgctggct
gtcaaagtcggacgaatctccattgtggaaatgacggacttgaatatcagtgaactgctg
gagtttatccaattgcttcagctctccgaaaaagaacaggttatcgcccgccaggtctta
aaagaaatcaaggagaggctgggcttcttggtcaatgtcggtttggattacctgaccttg
ggcagagcggcaggaacattgtccgggggcgaggcgcagaggatccgccttgccactcag
atcgggtcgagcttgaccggtgtactgtatgttttggatgagcccagcataggtcttcat
caacgggataatgcccgtcttttgtctaccttgaaaaatctgagggatctcggcaatacc
ctcctggttgtcgaacatgacgaggataccatgctggaagccgaccacattatcgacatc
ggaccaggagccggcgctcatggaggaaagatcattgcccagggaacggttgccgagatc
aaggaagtcccggaatcaataaccggtcaatatcttagcggcaaaagaaaaatcgccgtt
cctgaagaacgccggacggccaatggcaaatggctggaagtcaaaggagcggcggagaat
aacctgcaaggaataacagctaaaattccggtgggattgtttacttgcgtaaccggagtc
tcggggtcaggtaaaagctcccttgtcaatgaagtcatctataaaggattgatgaatgag
atcggacaaagcagcagaatcaagcccgggaaatatgagcagataaaaggattggaatat
gttgataaggtcattgatatcgaccagtcgccaataggcaggactcccaggtcaaatccg
gcaacctatacaggtgtttttgatttgattcgcgagcttttttctcaggttcccgaagca
aaaatacggggatataaacagggccgcttcagcttcaatgtaaaaggcggaagatgtgaa
gcttgcaggggggacggcattatcaagattgaaatgcatttcttaccggatgtctatgtg
ccctgtgaaatctgccggggccagagatataaccgtgaaaccttagaagtacgctataaa
ggcaagaatattgcggaagtcttggatatgaccgtcgaagaggctttagcgtttttcagc
gcggttccccgaatcgcccgcaaacttcaaactctttttgatgtcggcctgggctatatc
aagctgggacagccggccaccacactttccggaggagaggcccaaagaatcaagctggca
acagagctttcccggcgcagcacgggcaagaccatttatattctggatgagccgactaca
gggttgcatatcgccgatgtggataaacttctgctggtattgcaccgtctggtagaagcc
ggggatacagttttggttattgagcataatctggacgtgattaaaacggcagactatatc
attgatctcggtccggaaggcggcaaccggggaggggagatcgtggccgaaggaactccc
acagaaattgcccgaaataagaagtcccataccgggcattatttggttaaagctctggag
caggggaaaagctga
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